Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g04703 ATGGTGATTGTTGGAGTTGCAGTGCTGATAATGTTGTGTTACTGCATTAGAACAAAGACCTTCACTCCAGCATTTCCTTTGCTCAGGAAGGAGAATCCAACCCATCAAATTATTGAGATGTTTTTGAAGGAACAAGGACCGCTTCTTGCTGCTAGGTACAGTTATTCAGAAGTCAAGAAAATAACCAACTCTTTTAGAAACAAATTAGGTCAGGGAGGATACGGAAGTGTATACAAAGGGAAGTTACATGATCAGCGGACTGTCGCAGTGAAAGTTTTAAGTGAATCAAAAGGCGACGGCGAAGATTTTATTAATGAAGTTGCGAGTATTAGTAGAACTTCACATGTCAACGTTGTTAGACTTTTGGGGTTCTGTTTGGATGGTTCTAAAAAGGCACTAATATATGAATTCATGCCTAATGGATCTCTTGAGAAGTTCATATATGAAGAGAAAAATCCAATCAGGGATGATCGCCAATTGGATTGCAAAACATTGTATGATATTGCAGTTGGCGTTGCCCATGGGTTAGAGTACTTGCACAGAGGTTGTAACACTAGAATCTTACATTTTGACATAAAACCTCATAATATATTACTTGATGAGGATTTTGGTCCTAAAATTTCAGATTTTGGACTTGCTAAAATATGTCTAAGAAAAGAAAGCATTGTATCAATATTTGGTGCAAGGGGAACACCAGGATATATTGCTCCAGAGTTGTTCTCTAGACATTTTGGTGGGGTGTCACATAAATCAGATGTCTACAGTTATGGAATGATGGTTTTAGAGATGGTTGGCCGAAGAAAAAACATTAAGGTTGAAGTTGATTGTTCAAGCGAGTTATATTTTCCACACTGGATTTATAAGCGTCTTGAATTGAATCAAGATCTTGGACTCAGGTGTATTAAAAATGAAATTGATGAAGAAATGGTAAGAAAAATGACAGTGGTGAGTTTATGGTGCATACAAACTGACCCTTCACATCGACCAGCAATGAATAAAGTGGTGGAAATGTTGCAAGGGAGCCTTCAAATGTTGGAAATACCACCGAAACCCTTTTTATCCTCTCCTTCCACATCTTCACTCCATTTATCATCTGAAATATTGTGA 1107 0.3749 MVIVGVAVLIMLCYCIRTKTFTPAFPLLRKENPTHQIIEMFLKEQGPLLAARYSYSEVKKITNSFRNKLGQGGYGSVYKGKLHDQRTVAVKVLSESKGDGEDFINEVASISRTSHVNVVRLLGFCLDGSKKALIYEFMPNGSLEKFIYEEKNPIRDDRQLDCKTLYDIAVGVAHGLEYLHRGCNTRILHFDIKPHNILLDEDFGPKISDFGLAKICLRKESIVSIFGARGTPGYIAPELFSRHFGGVSHKSDVYSYGMMVLEMVGRRKNIKVEVDCSSELYFPHWIYKRLELNQDLGLRCIKNEIDEEMVRKMTVVSLWCIQTDPSHRPAMNKVVEMLQGSLQMLEIPPKPFLSSPSTSSLHLSSEIL 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g04703 368 ProSiteProfiles Protein kinase domain profile. 63 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g04703 368 ProSitePatterns Serine/Threonine protein kinases active-site signature. 187 199 IPR008271 GO:0004672|GO:0006468
Mepo4g04703 368 ProSitePatterns Protein kinases ATP-binding region signature. 69 91 IPR017441 GO:0005524
Mepo4g04703 368 SMART serkin_6 63 338 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g04703 368 SUPERFAMILY Protein kinase-like (PK-like) 45 338 IPR011009 -
Mepo4g04703 368 FunFam serine/threonine-protein kinase PBS1-like 34 137 - -
Mepo4g04703 368 Gene3D Transferase(Phosphotransferase) domain 1 138 347 - -
Mepo4g04703 368 Gene3D Phosphorylase Kinase; domain 1 43 137 - -
Mepo4g04703 368 PANTHER RUST RESISTANCE KINASE LR10-RELATED 35 356 IPR045874 GO:0004672
Mepo4g04703 368 FunFam PR5-like receptor kinase 138 350 - -
Mepo4g04703 368 Pfam Protein kinase domain 67 336 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g04703 Mepo-Chr4 56489830 56491116 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g04703 2 354 Receptor kinase-like Gene Family AT4G18250 54.294 5.90e-128 381
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Mepo4g04703 Pkinase 1.8e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g04703 - - mtr:11418569 664.84