Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g04700 ATGGCTGTGAATCTGACGGAAGGGGCGATAGAGAGAATTTGCAGAGACGATATCTCTTGTGTTGAAGTTGAAGAGTTTAGGCCGGTGTTGCAAGTCATTGATGTGAAAATATACCGTCTTTTGCTGTCTGATGGTACGCATACCAATGTTGGAGTGCTCAGCATTGGATTGCAAGAGTTGGTCTTACACAGGATGTTGCAGAAAGGCTCAATTGTTAGGCTCAATGACTTTTCTCCTTCAATGATTATTTTCATCTCTGACCTTGAAATTCTACGGGACAAATGTCATCTGATCGGAGAACCCGCTCCTTCCCACCTTATTCGGTTTTCTGACCTTGAGTTATCTGACGGTATACAAGATAGTATAATGGAAATGGATCTGAATCTGATGCAGGGGGCAATAGAGAGAATGTACAGTGACAATTTATCTTGTGATGAAGAGGAGTTTAAGCCAGTGCTGCAAGTCATACACATGGAAAGCAGCCCTCTTTGGCTGTCTGATGGTTCACATTCTACTATTGCCATGCTCTCCCCTGATTTGGATGAAGAGTTTGAATACCTGCCCGACTCTTCCAAAAGGCTGCAGAAAGGCTCGTTTGTTAAACTTACTAACTTCAAGTTTGAAACATATATACACACCAAGATTATTTTCATCTCCGGCCTTGAAATTCTACTGGACAAATTTAGACGAGATAGAATAGAGGGTGAGAATCTGACACAAGGGGCGATAGAGAGAATGTACAACGACAATTTCTCTTGTGATGAAGAGGAGTTTAAGCCGGTGCTGCAAGTCATCCACATGGAAACCAGCCCTCTTTGGCTGTCTGATGGTACACATTCTACCATTGCAATTATCTCCCCTGATTTGGAAGAAGATTATGTCCATCCTGCAAATCACTCCGTCGAACACCAGTTTGCCACATTCAGAAGGATCCTGCATAACAGCTCGTTTGTTAAACTCACTAACTTCAAGTTGGAAACATTAACACACACCCAGTGA 999 0.4264 MAVNLTEGAIERICRDDISCVEVEEFRPVLQVIDVKIYRLLLSDGTHTNVGVLSIGLQELVLHRMLQKGSIVRLNDFSPSMIIFISDLEILRDKCHLIGEPAPSHLIRFSDLELSDGIQDSIMEMDLNLMQGAIERMYSDNLSCDEEEFKPVLQVIHMESSPLWLSDGSHSTIAMLSPDLDEEFEYLPDSSKRLQKGSFVKLTNFKFETYIHTKIIFISGLEILLDKFRRDRIEGENLTQGAIERMYNDNFSCDEEEFKPVLQVIHMETSPLWLSDGTHSTIAIISPDLEEDYVHPANHSVEHQFATFRRILHNSSFVKLTNFKLETLTHTQ 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g04700 332 Gene3D - 128 233 IPR012340 -
Mepo4g04700 332 Gene3D - 236 332 IPR012340 -
Mepo4g04700 332 Gene3D - 3 105 IPR012340 -
Mepo4g04700 332 SUPERFAMILY Nucleic acid-binding proteins 1 99 IPR012340 -
Mepo4g04700 332 SUPERFAMILY Nucleic acid-binding proteins 125 227 IPR012340 -
Mepo4g04700 332 Pfam Replication factor-A protein 1, N-terminal domain 5 81 IPR007199 GO:0003677|GO:0005634|GO:0006260
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g04700 Mepo-Chr4 56478353 56479979 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g04700 1 105 Core DNA Replication Machinery Family AT5G45400 32.800 1.03e-11 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g04700 K07466 - mtr:112421906 115.161