Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g04699 ATGATTATTCTCATCTTTGACCTTGAAATTGTACTGGAGAAATGTGATCTGGTCAGAGAACCTGTCCCGCTACTCAAAGCTAGACAAGATAGAATAATGGGTGTGAGTCTGACACAAGCGGCGATAGCGAGAATGTACAGCAACAAATTCTCTTTTGATAAAGAGTTTAAGCTGGTGTTGCAGGTTATCCACATGAATATCCCCTATCTTTTGCTGTCTGAAGGTCTGTGCTATAATACTGTAATCCTCCCTAGGAATTTGGTAGAGTTGGTCCATTCCGGAAGGCTGCAGAAAGGCTCGGCTGTTAAACTCACTCACTTCACCGCAAGTCTGATTCAAAACCACAACTGGAAGAGGTCCATGTTCTTTCAAGAATTCCTCAATAATTTGATGGGTCGAACTCTCCTTCCTGAACAAAAGAAATGCTGGAGGACAGACCTTTCTCTTAATGCAGTAAGCCAACAACATCAGCCCTGGAACTCCAATTGCTACCATGGCTGCTGGAGAATCATAAATTATTTGAAACGCAATGTTTAG 537 0.4227 MIILIFDLEIVLEKCDLVREPVPLLKARQDRIMGVSLTQAAIARMYSNKFSFDKEFKLVLQVIHMNIPYLLLSEGLCYNTVILPRNLVELVHSGRLQKGSAVKLTHFTASLIQNHNWKRSMFFQEFLNNLMGRTLLPEQKKCWRTDLSLNAVSQQHQPWNSNCYHGCWRIINYLKRNV 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g04699 178 Pfam Replication factor-A protein 1, N-terminal domain 37 114 IPR007199 GO:0003677|GO:0005634|GO:0006260
Mepo4g04699 178 SUPERFAMILY Nucleic acid-binding proteins 33 114 IPR012340 -
Mepo4g04699 178 Gene3D - 36 127 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g04699 Mepo-Chr4 56476326 56478219 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g04699 33 113 Core DNA Replication Machinery Family AT5G45400 30.526 2.72e-06 45.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g04699 - K07466 mtr:112421906 60.077