Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g04689 ATGAACCAAAGACAACCCTTCTTCTTTCTCTTCTCTTCTCCCTTAATTTATTCATACATCACCCTTTTTCATCTTCTTCTTACCACAACCCCTGTATGCTCTATAGAACAAAAATTTGTAGATTGTGAAGCCAAAACATGTGGCAACCAAAGTATAAGCTACCCTTTCTATATCAAAGGATTACAACAACGCTATTGTGGCTACCCTGGTTTTGGTATCTCTTGTGACAATAATATTGGTTTTCCAATCCTTAATCTTTCTAATTCTGAATACATAATCGAGAAGATTTTCTATCAAAACCATTCATTAAGAGTGTCCAATGGTGTGTTTTCAAGATCAAACACCAGCAAAGGTTGTCTTTCACCAACCCAAATCCTCACCTCTCCCAATAACATGTTCCATCTTGCACCAAACCAAACTGATGTGAGAGTGTTCTTCGGATGCGACTCAACAAAGCTACCTAGCACTCTGCAAGGGAACAAAATCGGTTGTTTTGCAGAAAATGAAACGAGTTCAGTTGTGGCATTGTATGCGGATGATAAAAATGTAAGCCTAGCGTCAAAGAATTGCAGGGATGAAGTGGTGTATGCGATGGTGGAAAATGTTGTGAAAGGAGGGGTTGAAGAGTCACTGAGAAATGGGTTTAGGTTGAATTGGATAGCCAGTGATTGCAATGATTGTAACAGAACTGGAGGAAGGTGTGGATTTGATAGAGTTGCATACACTTTCAAGTGTTACTGCACTGATAGAGTTCATTCTGCAAAATGTGATACAGTTACAAAAGAGCTGACTCGGAATGCCAAACTGGGTATAGTTAAAGGGCTGACTCGGAATGCCAAACTGGGTATAGGTTTGGGGATTGGTATTGGAATCCCAGGCATCTTGTTGATTGGGGCGGTGTTGGTGTTTCTCCTTCGACTCTACAAACGGAAACATGCTATTTCGGTTGGACACTTCCAATCTAGTAACTCTTATTCTGATTCCTCCATAAATCCACGCAGAGAGACTGGTAGTAAATATTTCGGAGTTCCATTATTCTCCTACGATGAGCTTAGAAAAGCAACAAACAATTTTGACCATAATAAAGAACTTGGAGATGGAGGCTTTGGTACCGTCTACTTTGGGAAACTTCCAGATGGACGTGAAGTTGCCGTCAAGCGTTTATACGAACACAACTATAGGAGAGTAGAACAGTTCATGAATGAAGTCAATATTCTGACAACTTTGCGGCACAAAAATCTCGTGTCCCTCTATGGATGCACTTCACGGCACAGTCGTGAACTACTTCTTGTGTATGAATATATCTCAAATGGCACCATTGCATGTCATCTCCATGGTGAATTGGCCAAGCCCGACTTACTACCATGGTCTATACGAATTAAAATTGCCATAGAGACTGCTAATGCCTTGGCTTATCTCCATGCTTCTGGGATCATTCACCGTGACGTGAAAACCAACAATATACTTCTTGACGGAAATTTTGGTGTTAAAGTTGCAGATTTTGGCCTTTCAAGACTATTCCCCGAGGATGCTACTCATGTCTCCACAGCTCCACAAGGAACACCAGGTTACCTTGACCCCGAGTATCACCAATTTTATCAGCTTACTAGCAAGAGTGATGTATATAGTTTTGGAGTTGTGCTCATTGAGCTAATATCATCAAAGCCTGCTGTTGATATAAATAGAAGTAGGGAAGAGATTAACTTGTCAACTCTAGCCACAAAGAAGATTCAAGAAAGTGCAATTGATGAGCTCGTAGATCCTTCTCTTGGTTTTCATTCAGACAGTGAGGTTAATAGGATGATAGTTTCAGTGGCAGAATTGGCTTTTCAGTGTTTGCAAAGGGACAAAGAGTTAAGACCTTCTATGGAAGAAGTATTAGATGAACTTAGGAGAATAGAAAGTGGGAAAGATGGGGTTGAGGTTGTAGAGGAGGCAGATGTTGATGGTGTTGGATCATCACACAGTATTGTACAGCCACCACCAGTCTCACCTGAATGGGATGAAGTTGGATTATTGAAGAATGTGAAAATTATGAAGCATCCGTCTTCACCAAACACCGTCACTGATAAATGGGAAAGTATTAATACTACGCCTAATGCCAGTGCGTAA 2112 0.4077 MNQRQPFFFLFSSPLIYSYITLFHLLLTTTPVCSIEQKFVDCEAKTCGNQSISYPFYIKGLQQRYCGYPGFGISCDNNIGFPILNLSNSEYIIEKIFYQNHSLRVSNGVFSRSNTSKGCLSPTQILTSPNNMFHLAPNQTDVRVFFGCDSTKLPSTLQGNKIGCFAENETSSVVALYADDKNVSLASKNCRDEVVYAMVENVVKGGVEESLRNGFRLNWIASDCNDCNRTGGRCGFDRVAYTFKCYCTDRVHSAKCDTVTKELTRNAKLGIVKGLTRNAKLGIGLGIGIGIPGILLIGAVLVFLLRLYKRKHAISVGHFQSSNSYSDSSINPRRETGSKYFGVPLFSYDELRKATNNFDHNKELGDGGFGTVYFGKLPDGREVAVKRLYEHNYRRVEQFMNEVNILTTLRHKNLVSLYGCTSRHSRELLLVYEYISNGTIACHLHGELAKPDLLPWSIRIKIAIETANALAYLHASGIIHRDVKTNNILLDGNFGVKVADFGLSRLFPEDATHVSTAPQGTPGYLDPEYHQFYQLTSKSDVYSFGVVLIELISSKPAVDINRSREEINLSTLATKKIQESAIDELVDPSLGFHSDSEVNRMIVSVAELAFQCLQRDKELRPSMEEVLDELRRIESGKDGVEVVEEADVDGVGSSHSIVQPPPVSPEWDEVGLLKNVKIMKHPSSPNTVTDKWESINTTPNASA 703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g04689 703 Pfam Wall-associated receptor kinase galacturonan-binding 42 106 IPR025287 GO:0030247
Mepo4g04689 703 FunFam WAK1-OsWAK receptor-like cytoplasmic kinase (OsWAK-RLCK) 330 434 - -
Mepo4g04689 703 ProSiteProfiles Protein kinase domain profile. 358 633 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g04689 703 Gene3D Phosphorylase Kinase; domain 1 330 434 - -
Mepo4g04689 703 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 23 697 IPR044652 GO:0004672
Mepo4g04689 703 SMART serkin_6 358 633 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g04689 703 FunFam Wall-associated receptor kinase-like 20 435 642 - -
Mepo4g04689 703 SUPERFAMILY Protein kinase-like (PK-like) 336 630 IPR011009 -
Mepo4g04689 703 MobiDBLite consensus disorder prediction 680 703 - -
Mepo4g04689 703 Gene3D Transferase(Phosphotransferase) domain 1 435 644 - -
Mepo4g04689 703 Pfam Wall-associated receptor kinase C-terminal 171 249 IPR032872 -
Mepo4g04689 703 ProSitePatterns Protein kinases ATP-binding region signature. 364 386 IPR017441 GO:0005524
Mepo4g04689 703 ProSitePatterns Serine/Threonine protein kinases active-site signature. 478 490 IPR008271 GO:0004672|GO:0006468
Mepo4g04689 703 Pfam Protein kinase domain 359 628 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g04689 Mepo-Chr4 56408723 56421935 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g04689 38 703 Receptor kinase-like Gene Family AT1G25390 44.776 9.23e-170 499
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Mepo4g04689 Pkinase 6.6e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g04689 - - psat:127098518 1119.38