Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mepo4g04668 | ATGGGTTTACAAAGCCAGCTAAACGACGTGTCGTCTGATTCAATTCCTTTACTGGTTCTGATGCACATCGCCACCTGCGTCAGTTACATCCGTTCGATGCTTCTCAATTTCCTCCAATCCATCGGTCTCTCACGCCTCCAAACTGATCAGATCGTCGACGATCACTTCCTCGCCGCCGTCGGATCGGGACTCGCCGGACTTATCATGCTCTCCGATCAACTCAACCTCAACAACCAAATCTTCTACACATACGAAGATGCCGCTTCCACCGACAATCACCGCTGCGTGTTCTGCCAATCCAACTTCGAAAACGGCGATCATGTTCGTAAGCTTCCTTGCCGCCATGTCTTCCACCGTCACTGCATCAACGGTTGGTTCCACCGCTTCAACTTCAGTTGTCCTTTATGCCGTTCTTCGCTACTCTCCGACGAGCGCGTGGCTCTCACCGAACGCCGTGTCGGTAGCCAACTCATCTCGTGGTTCACCCTTCGCTGA | 495 | 0.5273 | MGLQSQLNDVSSDSIPLLVLMHIATCVSYIRSMLLNFLQSIGLSRLQTDQIVDDHFLAAVGSGLAGLIMLSDQLNLNNQIFYTYEDAASTDNHRCVFCQSNFENGDHVRKLPCRHVFHRHCINGWFHRFNFSCPLCRSSLLSDERVALTERRVGSQLISWFTLR | 164 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mepo4g04668 | 164 | Pfam | Ring finger domain | 94 | 137 | IPR001841 | - | |
Mepo4g04668 | 164 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 69 | 142 | IPR013083 | - | |
Mepo4g04668 | 164 | SMART | ring_2 | 95 | 136 | IPR001841 | - | |
Mepo4g04668 | 164 | ProSiteProfiles | Zinc finger RING-type profile. | 95 | 137 | IPR001841 | - | |
Mepo4g04668 | 164 | CDD | RING-H2_PA-TM-RING | 95 | 137 | - | - | |
Mepo4g04668 | 164 | PANTHER | RING ZINC FINGER PROTEIN-RELATED | 78 | 147 | - | - | |
Mepo4g04668 | 164 | SUPERFAMILY | RING/U-box | 75 | 142 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Mepo4g04668 | Mepo-Chr4 | 56132104 | 56133027 | Dispersed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Mepo4g04668 | 1 | 163 | C3H Transcription Factor Family | AT1G15100 | 48.466 | 8.44e-46 | 145 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mepo4g04668 | K16282 | - | gmx:100803789 | 235.343 |