Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g04668 ATGGGTTTACAAAGCCAGCTAAACGACGTGTCGTCTGATTCAATTCCTTTACTGGTTCTGATGCACATCGCCACCTGCGTCAGTTACATCCGTTCGATGCTTCTCAATTTCCTCCAATCCATCGGTCTCTCACGCCTCCAAACTGATCAGATCGTCGACGATCACTTCCTCGCCGCCGTCGGATCGGGACTCGCCGGACTTATCATGCTCTCCGATCAACTCAACCTCAACAACCAAATCTTCTACACATACGAAGATGCCGCTTCCACCGACAATCACCGCTGCGTGTTCTGCCAATCCAACTTCGAAAACGGCGATCATGTTCGTAAGCTTCCTTGCCGCCATGTCTTCCACCGTCACTGCATCAACGGTTGGTTCCACCGCTTCAACTTCAGTTGTCCTTTATGCCGTTCTTCGCTACTCTCCGACGAGCGCGTGGCTCTCACCGAACGCCGTGTCGGTAGCCAACTCATCTCGTGGTTCACCCTTCGCTGA 495 0.5273 MGLQSQLNDVSSDSIPLLVLMHIATCVSYIRSMLLNFLQSIGLSRLQTDQIVDDHFLAAVGSGLAGLIMLSDQLNLNNQIFYTYEDAASTDNHRCVFCQSNFENGDHVRKLPCRHVFHRHCINGWFHRFNFSCPLCRSSLLSDERVALTERRVGSQLISWFTLR 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g04668 164 Pfam Ring finger domain 94 137 IPR001841 -
Mepo4g04668 164 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 69 142 IPR013083 -
Mepo4g04668 164 SMART ring_2 95 136 IPR001841 -
Mepo4g04668 164 ProSiteProfiles Zinc finger RING-type profile. 95 137 IPR001841 -
Mepo4g04668 164 CDD RING-H2_PA-TM-RING 95 137 - -
Mepo4g04668 164 PANTHER RING ZINC FINGER PROTEIN-RELATED 78 147 - -
Mepo4g04668 164 SUPERFAMILY RING/U-box 75 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g04668 Mepo-Chr4 56132104 56133027 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g04668 1 163 C3H Transcription Factor Family AT1G15100 48.466 8.44e-46 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g04668 K16282 - gmx:100803789 235.343