Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g04618 ATGATAATGGTGGTTTTTGGCGGGAAAAAGGTTCATCAAATCGTCACCGGCGTCGGCGGAAGCGGCCTTGGCCAGCTCGCCGTCGCCGTCGCTGTCTCTTTCCTTGTTCGTATTTTCTCTGCACCTGGTCCCGCTCTTTTGCCGGAAAACGACGATGACGAAGACGATGTTCCAATCAACGACGGTGAAACTTCTCCACCCGCCGGGAAAGTTACTCCGGTTACAATCCGCTGGAACAATATTAATTGTTCACTTTCTGATAAATCCTCCAAGTCCGTGAGATTTTTGCTTAAAAATCTGAGTGGAGAAGCAAAACCGGGAAGATTATTAGCAATAATGGGACCTTCAGGTTCAGGGAAGACAACATTGCTCAATGTTCTTGCTGGTCAGCTATCAGCGTCACCTCGGCTTCATTTGAGTGGTCTTTTGGAGTTCAATGGAAAGTCGAGTTCCAGAAACACTTACAAGTTTGCTTATGTGAGACAGGAGGATCTCTTCTTCTCACAGCTTACTGTGAGGGAAACATTGTCTCTTGCTATAGAATTACAGCTTCACAACATATCTTCTTCCGAAGAGAGGGATGAATATGTCAACAATCTCCTTTTCAAAACAGGCCTGGTCAGCTGTGCTGATACTAATGTTGGTGATGCAAAAGTTCGTGGAATCAGTGGTGGAGAAAAGAAACGTTTATCCTTGGCATGTGAACTGCTTGCAAGCCCATCTGTTATATTTGCTGATGAACCCACAACAGGACTTGATGCCTTCCAGGCTGAGAAGGTTATGGAAACTCTCCGACAACTTGCACTCGATGGTCATACTGTAATATGCTCTATACATCAGCCAAGAGGATCAGTGTACAGCAAATTCGACGACATTGTCTTGCTAACTGATGGTTCACTTGTTTATGCTGGTCCTGCTGGTGATGAACCATTGACGTACTTCTCAAAATTTGGGTACCACTGCCCAGATCATGTTAATCCTGCAGAATTTTTGGCCGATCTTATATCCATAGACTACAGTTCTTCTGACAGTGTCTATTCCTCTCAAAAAAGGATCAATGGGCTTGTTGAGTCATTCTCACTAAGACAATCCACAATAATATATGCTACTCCAATTACTCTAGATGACCTCTCGGAAAGTAGAAAGAGAATCAGCAAGAGGACTGTAGCAAAAACGAGAGGGGGCTGGTGGAAGCAATTTCGGTTGCTTCTTAGACGGGCATGGATGCAGGCTTCCCGTGATGCACCGACCAACAAAGTTCGGTCAAGGATGTCAATTGCATCAGCAGTTATCTTTGGGTCAGTTTTTTGGAGAATGGGAAAATCTCAGACTTCAATACAAGACAGAATGGGGTTGCTTCAGGTTGCTGCTATAAACACAGCTATGGCTGCTCTCACAAAGACTGTAGGCGTGTTTCCGAAGGAACGGTCAATTGTTGATAGAGAACGTTCCAAAGGCTCATATTCCTTGGGCCCCTATCTGTTTTCAAAACTATTGGCGGAGGCTCCCATTGGAGCAGCATTTCCATTAATGTTTGGTGCTGTTTTATACCCAATGGCACGTCTCCATCCCACTTTGATGAGATTTGGGAAATTCTGTGGAATCGTTACTGCAGAGTCCTTTGCTGCATCTGCGATGGGTCTTACTGTTGGTGCTATGGTTCCAACCACTGAAGCAGCAATGGCAGTAGGCCCCTCTCTTATGACAGTATTTATAGTATTTGGTGGCTACTATGTCAACCCTGAGAATACCCCAATCATCTTCCGCTGGATTCCTAGTGTTTCTCTGATTAGATGGGCCTTTCAAGGACTTTGCATCAATGAATTTCGTGGTCTTCAATTTGATCATCAGCATTCATTTGATATTCAAACTGGAGAACAGGCACTAGAGCGTCTTTCCTTTGGAAAAAGTACAATTAGGGATACACTGCTAGCGCAAAATAGAATATTGTTATTTTGGTATTGTACCACCTACCTTCTCCTTGAGAAAAACAAGCCCAAATACCAGCAACTTGAAACAACCCCTCCTAACCACAGTAAACCACATTTAAAACTCGAGGAGTTAAATCCTGAACAAGTTGATCAAACACATGAAATACCAGAGGTCAGCCAAGTTGGTTCGGACGAGCCCCTTGAGTCAACTGAAATAGACCCTGTTGGCTCCTTTATCCTAGAAGGTGCTCAGTAG 2187 0.4426 MIMVVFGGKKVHQIVTGVGGSGLGQLAVAVAVSFLVRIFSAPGPALLPENDDDEDDVPINDGETSPPAGKVTPVTIRWNNINCSLSDKSSKSVRFLLKNLSGEAKPGRLLAIMGPSGSGKTTLLNVLAGQLSASPRLHLSGLLEFNGKSSSRNTYKFAYVRQEDLFFSQLTVRETLSLAIELQLHNISSSEERDEYVNNLLFKTGLVSCADTNVGDAKVRGISGGEKKRLSLACELLASPSVIFADEPTTGLDAFQAEKVMETLRQLALDGHTVICSIHQPRGSVYSKFDDIVLLTDGSLVYAGPAGDEPLTYFSKFGYHCPDHVNPAEFLADLISIDYSSSDSVYSSQKRINGLVESFSLRQSTIIYATPITLDDLSESRKRISKRTVAKTRGGWWKQFRLLLRRAWMQASRDAPTNKVRSRMSIASAVIFGSVFWRMGKSQTSIQDRMGLLQVAAINTAMAALTKTVGVFPKERSIVDRERSKGSYSLGPYLFSKLLAEAPIGAAFPLMFGAVLYPMARLHPTLMRFGKFCGIVTAESFAASAMGLTVGAMVPTTEAAMAVGPSLMTVFIVFGGYYVNPENTPIIFRWIPSVSLIRWAFQGLCINEFRGLQFDHQHSFDIQTGEQALERLSFGKSTIRDTLLAQNRILLFWYCTTYLLLEKNKPKYQQLETTPPNHSKPHLKLEELNPEQVDQTHEIPEVSQVGSDEPLESTEIDPVGSFILEGAQ 728
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g04618 728 MobiDBLite consensus disorder prediction 679 694 - -
Mepo4g04618 728 FunFam ABC transporter G family member 7 74 312 - -
Mepo4g04618 728 Pfam ABC-2 type transporter 399 609 IPR013525 GO:0016020|GO:0140359
Mepo4g04618 728 ProSitePatterns ABC transporters family signature. 222 236 IPR017871 GO:0005524|GO:0016887
Mepo4g04618 728 MobiDBLite consensus disorder prediction 47 71 - -
Mepo4g04618 728 Pfam ABC transporter 97 249 IPR003439 GO:0005524
Mepo4g04618 728 MobiDBLite consensus disorder prediction 670 728 - -
Mepo4g04618 728 Pfam ABC-2 type transporter 279 339 IPR043926 GO:0140359
Mepo4g04618 728 SMART AAA_5 106 299 IPR003593 GO:0016887
Mepo4g04618 728 Gene3D - 70 310 IPR027417 -
Mepo4g04618 728 MobiDBLite consensus disorder prediction 696 710 - -
Mepo4g04618 728 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 76 322 IPR003439 GO:0005524
Mepo4g04618 728 CDD ABCG_EPDR 73 304 - -
Mepo4g04618 728 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 69 627 - -
Mepo4g04618 728 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 76 308 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g04618 Mepo-Chr4 55729297 55738960 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g04618 96 304 Calmodulin-binding Proteins AT2G36910 28.507 6.08e-11 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g04618 K05681 - gmx:100788256 1211.05