Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g04611 ATGGCAACTCTCTCTGAAACCTACGCTTGCGCACCATCCACCGAACGCGGCCGCGGCATTCTCATCTCCGGCGATCCCAAAACCAACAACATTCTCTATTGCACTGCACGATCCGTCATCATTCGCAATCTTGATAATCCCTTACAAGTCTCTGTTTACGGCGAACATTCTTATCCTGTCACCGTCGCACGTTACTCCCCCAACGGCGAATGGATCGCGTCCGCTGATGTTTCTGGTACCATTCGCATTTGGGGAACTCATAATGATTATGTTCTCAAGAACGAGTTTCGTGTTCTATCTAGTCGGATCGATGATCTTCAGTGGTCTGCAGATTGCCAGAGGATTGTTGCTTGTGGAGATGGAAAGGGAAAATCGTTTGTTCGCGCTTTTATGTGGGATTCAGGTTCCACTGTTGGTGATTTTGATGGCCATTCGCGGCGGGTTCTAAGTTGTGCATTCAAACCAACAAGGCCATTCCGCATTGTCTCGTGTGGAGAAGATTTTTTAGCAAACTTTTATGAAGGTCCACCGTTCAAGTTCAATATGTCCATCAGGGACCATACGAATTTTGTCAATTGTGTTAGATATTCTCCAGATGGGAGCAAATTCGTTACAGTTAGCTCAGATAGGAAGGGTATTATATATGATGGAAAGACTGGGAGTAAACTTGGAGAGTTTTCTGAAGAGGACGGTCACAAGGGCAGCATATATGCTGTTAGTTGGAGTCCTGACAGTAAACAGGTTCTTACTGTCTCTGCTGACAAGTCTGCAAAAGTGTGGGATATTGATGAGAATGGTAGTGGAACAGTACATAAGACATTGGCACATCCTGAATCTGGTGGGGTGGAGGACATGCTCGTTGGTTGTCTTTGGCAGAATGATCATCTGCTTACTGTCTCCCTTGGTGGCACGATTAGTTTATACTCTGCTAAGGATCTAGATCAAAACCCAAAGTCCTTATCTGGTCACATGAAGAATATCACTGTTTTGAATCTGCTCAACAAAAGTGAAAAGATGCTTTTGTCCAGCAGCTATGATGGAGTGATCATTAGATGGATTCCAGGCATTGGCTATAGTGGTAAGTTTGACAGTAAACAATTTGGATTAATCAAATTGTTAGCAGCTGCTGAAGAAGAAGTTGTTACTTCTGGATTTGACAACAAGGTATACAGAGTTCCCCTACAAAGGGATAATTTTGGTCCTGCTAAGCATGTTGATGTTGGAAGCCAGCCAAAGGATTTGGGCCTTGCACTTAATTCCCCCAAGCTTGCTCTTATTGCAATTGAATCTGGGGTTGTCTTACTTAACGGTTCAAATATTGTCACCATTGTAAACCTTGGCTTTGTTGTGACAGCGTCTACTATTTCACTTGATGGCAGTGAAGCAATTGTAGGTGGGCAAGATGGTAAGCTGCATATTTATTCTATCTCAGGAGATAAACTTACAGAACAGACTGTTCTTGAGAAGCACCGAGGAGCAATCAGTGTAATCAGATATTCTCCGGATGTTTCCATGTTTGCATCAGCTGATCTTAATCGTGAAGCTGTTGTCTGGGACTGTGCTTCCAGAGAGGTGGTGCTTAATAACATGTTGTTTCACACTGCACGTGTAAATTGTCTTGCTTGGTCACCTGATAGCAAACTGGTAGCTACTGGTTCACTTGATACATGTGTTATTGTATATGAAATTGGAAAGCCAGCATCAAGCCGCAGAACCATAAAAGGGGCTCATTTAGGTGGAGTGTATGGCTTGACTTTTATTGAGCCAGAAAGAGTGGTCAGTTCAGGAGAAGATTGTTGCGTTCGTGTTTGGGATTTAATTTCCGAATAA 1830 0.4339 MATLSETYACAPSTERGRGILISGDPKTNNILYCTARSVIIRNLDNPLQVSVYGEHSYPVTVARYSPNGEWIASADVSGTIRIWGTHNDYVLKNEFRVLSSRIDDLQWSADCQRIVACGDGKGKSFVRAFMWDSGSTVGDFDGHSRRVLSCAFKPTRPFRIVSCGEDFLANFYEGPPFKFNMSIRDHTNFVNCVRYSPDGSKFVTVSSDRKGIIYDGKTGSKLGEFSEEDGHKGSIYAVSWSPDSKQVLTVSADKSAKVWDIDENGSGTVHKTLAHPESGGVEDMLVGCLWQNDHLLTVSLGGTISLYSAKDLDQNPKSLSGHMKNITVLNLLNKSEKMLLSSSYDGVIIRWIPGIGYSGKFDSKQFGLIKLLAAAEEEVVTSGFDNKVYRVPLQRDNFGPAKHVDVGSQPKDLGLALNSPKLALIAIESGVVLLNGSNIVTIVNLGFVVTASTISLDGSEAIVGGQDGKLHIYSISGDKLTEQTVLEKHRGAISVIRYSPDVSMFASADLNREAVVWDCASREVVLNNMLFHTARVNCLAWSPDSKLVATGSLDTCVIVYEIGKPASSRRTIKGAHLGGVYGLTFIEPERVVSSGEDCCVRVWDLISE 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g04611 609 ProSiteProfiles Trp-Asp (WD) repeats profile. 184 225 IPR001680 GO:0005515
Mepo4g04611 609 SMART WD40_4 436 475 IPR001680 GO:0005515
Mepo4g04611 609 SMART WD40_4 523 562 IPR001680 GO:0005515
Mepo4g04611 609 SMART WD40_4 267 309 IPR001680 GO:0005515
Mepo4g04611 609 SMART WD40_4 177 216 IPR001680 GO:0005515
Mepo4g04611 609 SMART WD40_4 313 353 IPR001680 GO:0005515
Mepo4g04611 609 SMART WD40_4 219 261 IPR001680 GO:0005515
Mepo4g04611 609 SMART WD40_4 89 133 IPR001680 GO:0005515
Mepo4g04611 609 SMART WD40_4 480 519 IPR001680 GO:0005515
Mepo4g04611 609 SMART WD40_4 566 605 IPR001680 GO:0005515
Mepo4g04611 609 SMART WD40_4 134 174 IPR001680 GO:0005515
Mepo4g04611 609 SMART WD40_4 46 85 IPR001680 GO:0005515
Mepo4g04611 609 ProSitePatterns Trp-Asp (WD) repeats signature. 592 606 IPR019775 -
Mepo4g04611 609 ProSiteProfiles Trp-Asp (WD) repeats profile. 487 528 IPR001680 GO:0005515
Mepo4g04611 609 FunFam Actin-interacting protein 1 338 606 - -
Mepo4g04611 609 ProSiteProfiles Trp-Asp (WD) repeats profile. 53 94 IPR001680 GO:0005515
Mepo4g04611 609 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 229 263 - -
Mepo4g04611 609 Pfam WD domain, G-beta repeat 576 605 IPR001680 GO:0005515
Mepo4g04611 609 Pfam WD domain, G-beta repeat 50 84 IPR001680 GO:0005515
Mepo4g04611 609 Pfam WD domain, G-beta repeat 533 561 IPR001680 GO:0005515
Mepo4g04611 609 Pfam WD domain, G-beta repeat 183 211 IPR001680 GO:0005515
Mepo4g04611 609 Pfam WD domain, G-beta repeat 223 261 IPR001680 GO:0005515
Mepo4g04611 609 PANTHER WD-REPEATCONTAINING PROTEIN WDR1 1 605 - -
Mepo4g04611 609 SUPERFAMILY WD40 repeat-like 292 476 IPR036322 GO:0005515
Mepo4g04611 609 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 53 84 - -
Mepo4g04611 609 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 487 519 - -
Mepo4g04611 609 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 29 567 IPR011047 -
Mepo4g04611 609 ProSiteProfiles Trp-Asp (WD) repeats profile. 574 609 IPR001680 GO:0005515
Mepo4g04611 609 ProSiteProfiles Trp-Asp (WD) repeats profile. 530 563 IPR001680 GO:0005515
Mepo4g04611 609 FunFam Actin-interacting protein 1 11 337 - -
Mepo4g04611 609 CDD WD40 56 352 - -
Mepo4g04611 609 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 530 563 - -
Mepo4g04611 609 Gene3D - 11 339 IPR015943 GO:0005515
Mepo4g04611 609 ProSitePatterns Trp-Asp (WD) repeats signature. 248 262 IPR019775 -
Mepo4g04611 609 Gene3D - 7 605 IPR015943 GO:0005515
Mepo4g04611 609 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 574 609 - -
Mepo4g04611 609 ProSiteProfiles Trp-Asp (WD) repeats profile. 229 263 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g04611 Mepo-Chr4 55683333 55687811 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g04611 184 508 Eukaryotic Initiation Factors Gene Family AT2G46290 23.547 1.92e-08 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g04611 K24736 - gmx:100798693 1069.3