Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g04608 ATGGATCCAGTGCCTGAGGCTGATGTGTCTAAACCACCTCCTGTGAAAGTGCCATCTATGACACCTCCTTCTAAAGAGGATGATGGTCAAGCTTCTGCTTTTGTAGCCTCTGGACAAGATAATTCTGCCCGTGAAGCACCATCTAAGCTATCTCCCACAGGCATATCTTCTTGGGCCAAAAATTTAAAAATTTCTCAGCCATTTTCTGGCTCCCAAGATGACTCATCAAGTGGAAGCGCTGGGAAATCAGCTTTTGCCCGCATTACAAGTAATTTGGGAATGCGATTGTCTCCAAAATCTCCTGTGGCAGATGACAATTCCAATGAACCAGCAGCACAATCTAATTTGTTTGGAACTATCACAAAAGGCCTCGTTGACTCTTCAAAGAATGCGGTGAAAGCTGTGCAGGTTAAAGCTCGACATGTTGTTTCTCAAAATAAACGCAGATACCAGGAAGGTGGTTTTGATTTAGATATGACGTATATCACAGAAAACATTATTGCAATGGGGTTCCCTGCTGGTGATATGAGCTCTGGTTTTTTTGGTTATGTTGAAGGATTTTATAGAAATCATATGGAAGAAGTGATTCAATTTTTTGAGACTCACCATAAGAATAAATACAAAGTATATAATCTTTGTTTGGAGCGGCTGTATGATGCATCATTGTTTGAGGGGAAGGTGGCTAGCTTCCCATTTGATGACCATAATTGTCCACCAATTCAACTGATTATATCATTTTGTCAAAGTGCTTACTCATGGTTGAAAGAAGACATTGAGAATGTGGTGGTTGTCCACTGTAAGGCTGGAATGGCCAGGACAGGGTTAATGATTTCTAGTCTTCTACTATTCTTAAAGTTCTTCCCAACTGCTGAGGAGTCGATGGATTACTATAATCAGAAAAGATGTGTTGATGGAAAAGGACTTGTTCTGCCTAGTCAGATTAGGTATGTCAAGTATTTTGAGCGGATCTTGACTTACTTTAATGGTGAATGCCCACCTGCCCGCAGGTGCATGCTTAGGGGATTCCGGCTTCACAGATGTCCTTACTGGATCAGGCCCTCTATAACCGTCTCAAATCATAGTGGTGTGCTGTTCTCAACCAAAAAGCATCCAAGGACCAAGGATCTTTTGTCAGAAGATTTTTGGTTTGCTGCTCCAAAGAAGGGAGTGATGGTCTTTGCTTTGCCGGGAGAACCTGGTCTCACAGAGTTGGCAGGGGACTTCAAAATCCATTTTCATGATCGTCAAGGAGATTTTTACTGTTGGTTGAACACAACTATGACAGAAAACAGGAAAATTTTAAATACCAGTGATCTCGATGGCTTTGACAAGAGAAAATTGCCTTCTCCAGGGTTCCAGGTTGAGGTTGTACTGGTGGATCATAATGGTGATGTTGTAACTTCCAAACATGAAGTCACAAAGAAATCAGATGAGAGTTCGAGTGTCAGTCCTGCCCCAGTTGAGGTGAGCGCTCCTGTACCAGATGCAGACAAAGAGTCAGGGGATGGAGATCATGACAAAGATGATGTATTTTCTGATGGTGAGGCCGAGCATCCTGCTTCTTCAAGAAGCAAGCAAACAAAAGCACCTTCTGAAGCAGTTGAAACAGTTGCAAGTAACACCAAAGAGTCTGAGGCAAACAAAATATCAAATCAAGTCACAAATATAACGCATGCAACAGAACAAGTTTCTTTGGGTAGCAAGATCTCTATGCCAAGTCATAGTACTGGCGAGCCAAAAAGTGATACGGGTGGAAGAACAGCGTCCAGTCTTGATGCGCCCAGCTCAGAAAGTGAATTTAAGGCCATGGCTGCAGATGCTTCTGTGTTTACATTTGGAGATGATGAAGATTACGAAAGTGATTGA 1866 0.4239 MDPVPEADVSKPPPVKVPSMTPPSKEDDGQASAFVASGQDNSAREAPSKLSPTGISSWAKNLKISQPFSGSQDDSSSGSAGKSAFARITSNLGMRLSPKSPVADDNSNEPAAQSNLFGTITKGLVDSSKNAVKAVQVKARHVVSQNKRRYQEGGFDLDMTYITENIIAMGFPAGDMSSGFFGYVEGFYRNHMEEVIQFFETHHKNKYKVYNLCLERLYDASLFEGKVASFPFDDHNCPPIQLIISFCQSAYSWLKEDIENVVVVHCKAGMARTGLMISSLLLFLKFFPTAEESMDYYNQKRCVDGKGLVLPSQIRYVKYFERILTYFNGECPPARRCMLRGFRLHRCPYWIRPSITVSNHSGVLFSTKKHPRTKDLLSEDFWFAAPKKGVMVFALPGEPGLTELAGDFKIHFHDRQGDFYCWLNTTMTENRKILNTSDLDGFDKRKLPSPGFQVEVVLVDHNGDVVTSKHEVTKKSDESSSVSPAPVEVSAPVPDADKESGDGDHDKDDVFSDGEAEHPASSRSKQTKAPSEAVETVASNTKESEANKISNQVTNITHATEQVSLGSKISMPSHSTGEPKSDTGGRTASSLDAPSSESEFKAMAADASVFTFGDDEDYESD 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g04608 621 FunFam Phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase TPTE2 133 330 - -
Mepo4g04608 621 ProSiteProfiles Phosphatase tensin-type domain profile. 148 327 IPR029023 -
Mepo4g04608 621 MobiDBLite consensus disorder prediction 1 20 - -
Mepo4g04608 621 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 241 301 IPR000387 GO:0016311|GO:0016791
Mepo4g04608 621 MobiDBLite consensus disorder prediction 34 55 - -
Mepo4g04608 621 MobiDBLite consensus disorder prediction 523 596 - -
Mepo4g04608 621 MobiDBLite consensus disorder prediction 468 600 - -
Mepo4g04608 621 MobiDBLite consensus disorder prediction 495 522 - -
Mepo4g04608 621 ProSitePatterns Tyrosine specific protein phosphatases active site. 264 274 IPR016130 GO:0016311|GO:0016791
Mepo4g04608 621 Gene3D Protein tyrosine phosphatase superfamily 133 330 IPR029021 -
Mepo4g04608 621 SMART PTEN_C2_2 332 460 IPR014020 -
Mepo4g04608 621 CDD PTP_PTEN 158 323 IPR045101 GO:0016791
Mepo4g04608 621 ProSiteProfiles C2 tensin-type domain profile. 334 461 IPR014020 -
Mepo4g04608 621 MobiDBLite consensus disorder prediction 1 55 - -
Mepo4g04608 621 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 161 329 IPR029021 -
Mepo4g04608 621 PANTHER PHOSPHATASE WITH HOMOLOGY TO TENSIN 125 570 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g04608 Mepo-Chr4 55654374 55661093 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g04608 37 621 Protein tyrosine phosphatase (PTP) family AT3G19420 70.067 0.0 839
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g04608 K01110 - gmx:100784003 1016.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g04608 4 55654374 55661093 Mepo4g04608 4 55654374 55661093 ECH
Mepo5g00691 5 6649087 6655347 Mepo4g04608 4 55654374 55661093 PCT