Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g04579 ATGGACAACAAGTTGCGCCATTACGAGATGAAGTTCTCTGACGATTCTTCCAGAGTTGGCGATGATAGTGCATATGATGAGTTTTTAAAAGTAATGATGGATTTCCAGGCTCAAAGAATTGACACAAGCGGTGTCACGACAAGAGCGAAAGAGCTGTTCAAAGGGCATACAATCACACTTCCGTTTCAACTTGAGACCACTGGATGGATGGATGCTAATTCTCGCCCCGAGCATCTATGA 240 0.4417 MDNKLRHYEMKFSDDSSRVGDDSAYDEFLKVMMDFQAQRIDTSGVTTRAKELFKGHTITLPFQLETTGWMDANSRPEHL 79
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g04579 79 Gene3D Paired amphipathic helix 8 60 IPR036600 GO:0006355
Mepo4g04579 79 SUPERFAMILY PAH2 domain 20 56 IPR036600 GO:0006355
Mepo4g04579 79 Pfam Paired amphipathic helix repeat 25 56 IPR003822 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g04579 Mepo-Chr4 55447569 55447885 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g04579 21 56 WRKY Transcription Factor Family AT4G12020 55.556 9.88e-08 45.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mepo4g04579 PAH 3e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g04579 K11644 - ppp:112285756 59.6918