Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g04561 ATGGAAACCAAAGATGAACTTCAAGTAATGGACCATTTGACCATACCAACAACAACAACAACAACTGGGACCAGTTTCTCTCAGTTACTATTAGGTGATGATGATAATGATAATCCATTAGGTCTTGATGTGGACCAAACTTTTTCCACCTCTCTTTTCTCTCTTCACAACACACCCAAAATGCTTTGTTTTGGTGACTATCAAAATGAAATTCATGAAACCACCACCAACGTAGTATTAACTCCTCAGAAATCTATCATCACTTCGAGTGATTCTTCTTCTGCTTCTTCATGCAACCACCAAACCAACACTGGTTTCAATTCTTTGACAACAACTAAATCCAATAGTTTGCAGAAAAAGCGGAATGGGTCAGGAGGACAAGAACTTGGGACAAAGGCAGGTGTTGGAGGGCAGAAAGGTCCTAAAAAGACCAAAGCAGACAACCCCACCTCAACTGGACATGCAAAGCCGAAAAAAGAGAAGCTTGGTGAACGAATTGCAGCGTTACAACAACTTGTTTCACCCTTTGGCAAGACTGATACAGCTTCGGTGCTTCACGAGGCTACTGGTTACATAAGATTCTTACATGATCAAGTTCAGGTTCTGTGCTCTCCATACTTGCAACCTTCACAAGTTCAATTTCAAAATCAGCCTGGGGACGGAGATAACAATGTCAATGTCAATGAAGAAGAAGTGAAGAATGATTTGAGGAGCAGAGGTCTGTGTTTGATCCCTGTTGGATGCACCTTACACGTGGCAAGTAGTAACGGTGCTGATTTTTGGTCACCTGCTTCAATAGGGAACAATGTTTCACCCTCAACTATTGCTAAGCAGTAA 837 0.417 METKDELQVMDHLTIPTTTTTTGTSFSQLLLGDDDNDNPLGLDVDQTFSTSLFSLHNTPKMLCFGDYQNEIHETTTNVVLTPQKSIITSSDSSSASSCNHQTNTGFNSLTTTKSNSLQKKRNGSGGQELGTKAGVGGQKGPKKTKADNPTSTGHAKPKKEKLGERIAALQQLVSPFGKTDTASVLHEATGYIRFLHDQVQVLCSPYLQPSQVQFQNQPGDGDNNVNVNEEEVKNDLRSRGLCLIPVGCTLHVASSNGADFWSPASIGNNVSPSTIAKQ 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g04561 278 CDD bHLH_AtbHLH_like 158 202 IPR045239 -
Mepo4g04561 278 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 156 213 IPR036638 GO:0046983
Mepo4g04561 278 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 59 252 - -
Mepo4g04561 278 MobiDBLite consensus disorder prediction 89 125 - -
Mepo4g04561 278 MobiDBLite consensus disorder prediction 89 161 - -
Mepo4g04561 278 Gene3D - 156 215 IPR036638 GO:0046983
Mepo4g04561 278 FunFam Transcription factor bHLH113 138 209 - -
Mepo4g04561 278 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 146 195 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g04561 Mepo-Chr4 55288157 55290460 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g04561 114 263 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G20640 47.333 2.51e-33 123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g04561 - - gmx:100809317 308.531
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g04561 4 55288157 55290460 Mepo4g04561 4 55288157 55290460 ECH