Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mepo4g04554 | ATGATGATCGAGGGAGATCAAACAAGTCTTACAACAGCAGCCATAGAACAACCAGGTGAAGTGATTGACAGAGATAAGAACATCGATGATGGAAGCGAAAATGACAGTCCCAAAGAGTGGTTAAATCTGAGCTTAGGAGGCACTTCATTCTCAACAGCTGGAGACCCTGATTCACAATCAAGACCAACCAAAGTTTTTTCATGCAATTTTTGCATGAGAAAGTTCTTTAGTTCACAAGCGTTAGGAGGTCATCAGAATGCTCATAAAAGGGAACGAGGTGCAGCAAGAAGATATCAATCTCAGAGTCAGAGGACGATGGCACTAATGGGCTTGTCCATGAACAATCCAATGCTTCGATCACTTGGTGTCCAAGCCCATTCACTAGTGCACAAGCCATGCAGAAGTGGAACTATGGTGGCGCCGAGCTTTCAAGAAGCATATGCAACAGGGCTCGGAATGGCATGTACAACTTTCATGTCTGAGGATCATACTAATCAGGTTTGGCCAGGCAGCTTTCGTATGGTTCCACAACAGCCCCAGCCACCACAGGAGACACTAAAGCTTGATTTAGACCTCAGACTCTGA | 585 | 0.453 | MMIEGDQTSLTTAAIEQPGEVIDRDKNIDDGSENDSPKEWLNLSLGGTSFSTAGDPDSQSRPTKVFSCNFCMRKFFSSQALGGHQNAHKRERGAARRYQSQSQRTMALMGLSMNNPMLRSLGVQAHSLVHKPCRSGTMVAPSFQEAYATGLGMACTTFMSEDHTNQVWPGSFRMVPQQPQPPQETLKLDLDLRL | 194 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mepo4g04554 | 194 | Gene3D | Classic Zinc Finger | 48 | 114 | - | - | |
Mepo4g04554 | 194 | MobiDBLite | consensus disorder prediction | 1 | 15 | - | - | |
Mepo4g04554 | 194 | MobiDBLite | consensus disorder prediction | 1 | 43 | - | - | |
Mepo4g04554 | 194 | MobiDBLite | consensus disorder prediction | 19 | 36 | - | - | |
Mepo4g04554 | 194 | SUPERFAMILY | beta-beta-alpha zinc fingers | 63 | 92 | IPR036236 | - | |
Mepo4g04554 | 194 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 66 | 93 | IPR013087 | - | |
Mepo4g04554 | 194 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 68 | 88 | IPR013087 | - | |
Mepo4g04554 | 194 | PANTHER | ZINC FINGER PROTEIN 4-LIKE | 16 | 194 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Mepo4g04554 | Mepo-Chr4 | 55243034 | 55244181 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Mepo4g04554 | 2 | 182 | C2H2 Transcription Factor Family | AT1G24625 | 36.170 | 3.85e-20 | 82.4 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mepo4g04554 | - | - | gmx:100306296 | 243.817 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Mepo4g04554 | 4 | 55243034 | 55244181 | Mepo4g04554 | 4 | 55243034 | 55244181 | ECH |