Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g04554 ATGATGATCGAGGGAGATCAAACAAGTCTTACAACAGCAGCCATAGAACAACCAGGTGAAGTGATTGACAGAGATAAGAACATCGATGATGGAAGCGAAAATGACAGTCCCAAAGAGTGGTTAAATCTGAGCTTAGGAGGCACTTCATTCTCAACAGCTGGAGACCCTGATTCACAATCAAGACCAACCAAAGTTTTTTCATGCAATTTTTGCATGAGAAAGTTCTTTAGTTCACAAGCGTTAGGAGGTCATCAGAATGCTCATAAAAGGGAACGAGGTGCAGCAAGAAGATATCAATCTCAGAGTCAGAGGACGATGGCACTAATGGGCTTGTCCATGAACAATCCAATGCTTCGATCACTTGGTGTCCAAGCCCATTCACTAGTGCACAAGCCATGCAGAAGTGGAACTATGGTGGCGCCGAGCTTTCAAGAAGCATATGCAACAGGGCTCGGAATGGCATGTACAACTTTCATGTCTGAGGATCATACTAATCAGGTTTGGCCAGGCAGCTTTCGTATGGTTCCACAACAGCCCCAGCCACCACAGGAGACACTAAAGCTTGATTTAGACCTCAGACTCTGA 585 0.453 MMIEGDQTSLTTAAIEQPGEVIDRDKNIDDGSENDSPKEWLNLSLGGTSFSTAGDPDSQSRPTKVFSCNFCMRKFFSSQALGGHQNAHKRERGAARRYQSQSQRTMALMGLSMNNPMLRSLGVQAHSLVHKPCRSGTMVAPSFQEAYATGLGMACTTFMSEDHTNQVWPGSFRMVPQQPQPPQETLKLDLDLRL 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g04554 194 Gene3D Classic Zinc Finger 48 114 - -
Mepo4g04554 194 MobiDBLite consensus disorder prediction 1 15 - -
Mepo4g04554 194 MobiDBLite consensus disorder prediction 1 43 - -
Mepo4g04554 194 MobiDBLite consensus disorder prediction 19 36 - -
Mepo4g04554 194 SUPERFAMILY beta-beta-alpha zinc fingers 63 92 IPR036236 -
Mepo4g04554 194 ProSiteProfiles Zinc finger C2H2 type domain profile. 66 93 IPR013087 -
Mepo4g04554 194 ProSitePatterns Zinc finger C2H2 type domain signature. 68 88 IPR013087 -
Mepo4g04554 194 PANTHER ZINC FINGER PROTEIN 4-LIKE 16 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g04554 Mepo-Chr4 55243034 55244181 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g04554 2 182 C2H2 Transcription Factor Family AT1G24625 36.170 3.85e-20 82.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g04554 - - gmx:100306296 243.817
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g04554 4 55243034 55244181 Mepo4g04554 4 55243034 55244181 ECH