Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g04543 ATGCTGCGTTTATGCTTAAGCCCTCTCGATTTTTGCTTCCGTCGCCGTGGTGCCTCTGACTTTCTCCTCTGGCACACCGACTTGAAACCTCACGCCTCCGGTGATTTCTCAATCGCCGTTGCTCAGGCTAATTACTCTCTCGAAGATCAAAGTCAAGTCTTCACCTCTCCTTCCGCCACCTATGTCGGTGTTTACGACGGTCACGGTGGTCCTGAAGCTTCTAGATTCGTCAACAACCGTCTTTTCCCCTATTTACACAAATTTGCCTCTGAGCAAGGGGGATTGTCAGCAGATGTGATAAAAAAGGCGTTTAGTAAGACCGAGGAGGACTTTTTGCATTTGGTTAAGTTGTCGTTGCCAATTAGTCCTCAGATTGCTTCTGTGGGATCATGTTGTCTTCTTGGTGCAATTTCTAACAATGTGTTGTATGTTGCCAACCTTGGTGACTCTAGAGTTGTTCTTGGTAGGAAGTATCTTGACAACAAGAATTCTCCTGTCGAGGCTGTGCGCTTGTCAACCGATCATAATGTAGCTGATGAGGAGGTGAGGAGAGAAGTTGAAGCTCTCCACCCTGACGACTCACACATTGTGGTTTATAGCCGTGGTGTTTGGAGGATTAAGGGCATCATACAGGTGTCTAGATCTATTGGTGATGTGTATTTGAAGAGACCAGATTTCTACAGAGATCCCATTTTCCGGCAATTTGGAAATCCTATTCCTTTGAAGCGTCCAGTAATGACAGCTGAACCATCAATCATCATTAGGGAGCTTGAGTCAGATGATTTATTCTTAATATTTGCATCAGATGGCCTTTGGGAACAATTAAGTGATGAAGCAGCAGTTGATATTGTTTTCAAATATCCAAGAGCTGGAATTGCCAAGAGATTAGTAAGAGCTGCTCTTCAGGAAGCTGCAAAGAAAAGAGAGATGAGATATGCTGACATAAAGAAAATTGACAAAGGAATTAGAAGACACTTCCATGACGATATCACTGTTATCGTGATCTATCTTGATCAGCATGGAAGCTCTTCTAGTGGTGAGTTTAAGCAAACTGCTGTTGGCTATACAACTGCCCCTGTTGATATATTTTCTCTAAATGCCGATGAAGCTGAGAAGAGCATGCTTGGTTCAGTTGGCTAA 1140 0.436 MLRLCLSPLDFCFRRRGASDFLLWHTDLKPHASGDFSIAVAQANYSLEDQSQVFTSPSATYVGVYDGHGGPEASRFVNNRLFPYLHKFASEQGGLSADVIKKAFSKTEEDFLHLVKLSLPISPQIASVGSCCLLGAISNNVLYVANLGDSRVVLGRKYLDNKNSPVEAVRLSTDHNVADEEVRREVEALHPDDSHIVVYSRGVWRIKGIIQVSRSIGDVYLKRPDFYRDPIFRQFGNPIPLKRPVMTAEPSIIIRELESDDLFLIFASDGLWEQLSDEAAVDIVFKYPRAGIAKRLVRAALQEAAKKREMRYADIKKIDKGIRRHFHDDITVIVIYLDQHGSSSSGEFKQTAVGYTTAPVDIFSLNADEAEKSMLGSVG 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g04543 379 Pfam Protein phosphatase 2C 56 306 IPR001932 -
Mepo4g04543 379 SUPERFAMILY PP2C-like 44 339 IPR036457 -
Mepo4g04543 379 PANTHER PROTEIN PHOSPHATASE 34 335 IPR015655 GO:0004722|GO:0006470
Mepo4g04543 379 SMART PP2C_4 29 335 IPR001932 -
Mepo4g04543 379 ProSiteProfiles PPM-type phosphatase domain profile. 35 337 IPR001932 -
Mepo4g04543 379 Gene3D - 26 345 IPR036457 -
Mepo4g04543 379 CDD PP2Cc 48 337 IPR001932 -
Mepo4g04543 379 FunFam Probable protein phosphatase 2C 42 26 345 - -
Mepo4g04543 379 ProSitePatterns PPM-type phosphatase domain signature. 61 69 IPR000222 GO:0043169
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g04543 Mepo-Chr4 55139078 55141850 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g04543 1 344 PP2C-type Phosphatase Gene Family AT3G51370 54.648 1.50e-140 403
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g04543 - K01102 gmx:100812137 660.603
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g04543 4 55139078 55141850 Mepo4g04543 4 55139078 55141850 ECH