Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g04542 ATGACGAGCGCTTCAGAACTATTCCACATCAGGAGACACCGATTAGGACGAAATGATATCGATTCATCTTTCCACTCCTCACCTTCTCCAGATTTCCATCATCACCACCGCCTTCACGACTCCGACGACGATGATTCTCCCCGTATCCGCCGCCACTACAACGTCCGCCGCCTCCGTCACCATGAACGTGTATCGGAAAGATTTGATGGAAGGTATCGTCGATCTCTGGTAAATGAAGGCGTTGAACCTGGAGAAAGTGTGAGTGGTGCTCCAAGGGCAAGTGGAAGTGAAAGATTACCAGTAGATGTGAGACTTGCGCGAGAAAGACTCCTTCAGAGGTTGAGAGGGGAGCCTGTTCATAGAAACAGGCAAAATGATAGAGATTCAGTGGACGAGGATCAAGAAAGCGAGTTATCAAGTGAAGTTCCAACTGAGGACTCTTTAATTACTGACTTGACTTCTCAAATGGCAAGGTTCCAGCTCTTGCATGAACAAACCAGAAAGCCACCAGGACTCACTCAGGAGGCCCTGAACTGTTTGCATTTTGAAGTTTTTAGCAGCATTGATATGGAATCAGAATCCAAGGTACTTCAGGATTGTGGGATATGCTTGGAATCTTTCGTGGATGGAGATAAACTGATCCATTTGCAATGTGGACATAAATTTCACTCTGCTTGTTTGGATCCTTGGATTCGCAGTTGTGGAGATTGTCCTTACTGTCGAAGATGTATAGTTGTAAATAGTCATCTTCCATAG 756 0.4563 MTSASELFHIRRHRLGRNDIDSSFHSSPSPDFHHHHRLHDSDDDDSPRIRRHYNVRRLRHHERVSERFDGRYRRSLVNEGVEPGESVSGAPRASGSERLPVDVRLARERLLQRLRGEPVHRNRQNDRDSVDEDQESELSSEVPTEDSLITDLTSQMARFQLLHEQTRKPPGLTQEALNCLHFEVFSSIDMESESKVLQDCGICLESFVDGDKLIHLQCGHKFHSACLDPWIRSCGDCPYCRRCIVVNSHLP 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g04542 251 MobiDBLite consensus disorder prediction 79 100 - -
Mepo4g04542 251 MobiDBLite consensus disorder prediction 116 130 - -
Mepo4g04542 251 MobiDBLite consensus disorder prediction 116 146 - -
Mepo4g04542 251 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 157 245 IPR013083 -
Mepo4g04542 251 Pfam Ring finger domain 199 241 IPR001841 -
Mepo4g04542 251 MobiDBLite consensus disorder prediction 18 48 - -
Mepo4g04542 251 PANTHER SI:CH211-59O9.10 49 246 - -
Mepo4g04542 251 SMART ring_2 200 240 IPR001841 -
Mepo4g04542 251 ProSiteProfiles Zinc finger RING-type profile. 200 241 IPR001841 -
Mepo4g04542 251 SUPERFAMILY RING/U-box 178 246 - -
Mepo4g04542 251 MobiDBLite consensus disorder prediction 28 48 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g04542 Mepo-Chr4 55131421 55134120 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g04542 1 245 C3H Transcription Factor Family AT1G49850 42.248 2.05e-44 148
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g04542 - - mtr:25485358 340.502
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g04542 4 55131421 55134120 Mepo4g04542 4 55131421 55134120 ECH