Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g04536 ATGGGACACTCAAATGTTTGGAACTCTCACCCCAAGACTTATGGTCCAGGTTCCCGCACTTGTCGTGTGTGCGGGAATTCACATGGATTGATTAGGAAGTATGGCCTTATGTGCTGCAGGCAATGCTTCCACAGCAATGCCAAGGAAATTGGCTTCATTAAGTACCGTTGA 171 0.4737 MGHSNVWNSHPKTYGPGSRTCRVCGNSHGLIRKYGLMCCRQCFHSNAKEIGFIKYR 56
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g04536 56 Gene3D 30s Ribosomal Protein S14; Chain N 1 56 IPR043140 -
Mepo4g04536 56 PANTHER 40S RIBOSOMAL PROTEIN S29 1 56 IPR039744 GO:0003735|GO:0008270
Mepo4g04536 56 Pfam Ribosomal protein S14p/S29e 7 56 IPR001209 GO:0003735|GO:0005840|GO:0006412
Mepo4g04536 56 FunFam 40S ribosomal protein S29 1 56 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g04536 Mepo-Chr4 55089623 55090854 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g04536 1 56 Cytoplasmic Ribosomal Protein Gene Family AT4G33865 92.857 1.18e-34 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g04536 K02980 - han:110916663 130.954
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo5g00031 5 339274 341183 Mepo4g04536 4 55089623 55090854 PCT