Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g04533 ATGAGTTGCAACGGTTGCCGAGTTTTGAGAAAGGGATGCAGTGAGGATTGCATGCTACGAGATTGTCTAACGTGGATACAAAACCCACAAGCACAGGCTAACGCCACTGTCTTTGTCACCAAGTTCTTCGGCCGTGCCACTCTCATGTCTTTTCTTTCACCTGTTCCTCCCAACCAAAGATCATGTTTGTTCCAGTCACTTATGTATGAAGCTGTTGGGAGAACTATAAATCCAGTAAATGGAGCAGTTGGGCTGTTATGGACTGGAAAGTGGCAATTATGTCAACTTGGTGTTGAACAAGTGCTGAGAGGTAACGGCGGCGCGTTGACGGCACTACCTGATCAATTGTTAGGTGTGGATCATGAGAGCAGTTCAATTGATCATCAATATCACCAACAGCAAGAGTTTATTATGGAAGAGAATTGTAATGAAGAAGAACAATCTGGGTTGATGTCACACTCTAGAGTGGTGAGAAGGAAGTGCAACCAAGCAAAAAAGCAACGTGCGGGGACACATGAGTCCGAGGAATCGGAGTCGTCCACGTTGGCAAGTAGAACAAGACGAGAAGATTGTTCTTATGTTTATGCTAATTCTCAAACTCAAAGGAACCAACTCCTTACACTATTCTTATGA 633 0.4423 MSCNGCRVLRKGCSEDCMLRDCLTWIQNPQAQANATVFVTKFFGRATLMSFLSPVPPNQRSCLFQSLMYEAVGRTINPVNGAVGLLWTGKWQLCQLGVEQVLRGNGGALTALPDQLLGVDHESSSIDHQYHQQQEFIMEENCNEEEQSGLMSHSRVVRRKCNQAKKQRAGTHESEESESSTLASRTRREDCSYVYANSQTQRNQLLTLFL 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g04533 210 ProSiteProfiles LOB domain profile. 1 107 IPR004883 -
Mepo4g04533 210 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 190 - -
Mepo4g04533 210 MobiDBLite consensus disorder prediction 161 184 - -
Mepo4g04533 210 MobiDBLite consensus disorder prediction 166 184 - -
Mepo4g04533 210 Pfam Lateral organ boundaries (LOB) domain 2 100 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g04533 Mepo-Chr4 55063351 55064325 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g04533 1 118 AS2 family AT3G49940 68.644 1.78e-55 175
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Mepo4g04533 LOB 1.4e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g04533 - - tpra:123921551 267.314
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g04533 4 55063351 55064325 Mepo4g04533 4 55063351 55064325 ECH
Mepo5g00656 5 6239797 6241127 Mepo4g04533 4 55063351 55064325 PCT