Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g04527 ATGGAATCTGCCCAATTGATTTCTGAAGAATGGGATTCTCTTAGTGGACAGTACACAGCTCAGGAAGCTGACTTCATGGCTCAGTTCCTTGGTTGTAATGGAAACACCAGTTTTGCCATGCCATCTTATTTTCCTTCAAGTAGTGGAACCTATTCATGTAATTTGGCAACAAATATTGATTCCTTGTCCATGTTTTTTTCCTTGGAAGATGCCAAATTTAGTCCACAATATTTGGATCATAACTTAACAAAAAAGATAAACTATGAATTCATTAATCATGAAGGGTTAGGTTTAGTTCTTGCTGACAACAAATTGTGGGATGAGAGGGAGCATGAAATGATGATGACTTCAGAAGAGGACAGAAGCAAAAACTTGGGAAACCCTGCAAAAAGATTAAGGAGCTCACTAGAGGTTTCAGAAAACATGAGGAATGTTAGGAAATGTCCAAAATCTGCTTGTATGAGCAACAATGAAGAGGGCCTAACGTGGCATGGCTCCAACAACTGTTTTCCACAGGTTAACTCTAATCCTTCTCTGGAGCAAAATGGAGGAACATCTTCAATTCTAAGCCTAAAAGAACCTGAAGCACCTAAATCATGTAGAAAATCAAAGGCAGGAAGTGGTCCTGCCACTGATGCACAAAGCATTTATGCAAGAAAGAGAAGAGAAAGAATAAATGAAAGGTTGAGAATCTTGCAAACTCTTGTCCCAAATGGAACTAAGTTGGATATTAGTACTATGCTTGAGGAAGCTGTCCAATATGTGAAGTTTTTGCAGCTTCAAATTAAGCTTTTGAGCTCTGAAGATATGTGGATGTATGCTCCAATTGCTTATAATGGAATGAACATTGGATTAGACCTCAGCTTTTCTTCTCCAACTAATTAA 885 0.3819 MESAQLISEEWDSLSGQYTAQEADFMAQFLGCNGNTSFAMPSYFPSSSGTYSCNLATNIDSLSMFFSLEDAKFSPQYLDHNLTKKINYEFINHEGLGLVLADNKLWDEREHEMMMTSEEDRSKNLGNPAKRLRSSLEVSENMRNVRKCPKSACMSNNEEGLTWHGSNNCFPQVNSNPSLEQNGGTSSILSLKEPEAPKSCRKSKAGSGPATDAQSIYARKRRERINERLRILQTLVPNGTKLDISTMLEEAVQYVKFLQLQIKLLSSEDMWMYAPIAYNGMNIGLDLSFSSPTN 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g04527 294 SMART finulus 215 264 IPR011598 GO:0046983
Mepo4g04527 294 Gene3D - 211 276 IPR036638 GO:0046983
Mepo4g04527 294 MobiDBLite consensus disorder prediction 174 189 - -
Mepo4g04527 294 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 211 276 IPR036638 GO:0046983
Mepo4g04527 294 Pfam Helix-loop-helix DNA-binding domain 219 259 IPR011598 GO:0046983
Mepo4g04527 294 FunFam Basic helix-loop-helix transcription factor 210 267 - -
Mepo4g04527 294 MobiDBLite consensus disorder prediction 174 218 - -
Mepo4g04527 294 CDD bHLH_AtIND_like 210 272 - -
Mepo4g04527 294 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 73 282 - -
Mepo4g04527 294 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 209 258 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g04527 Mepo-Chr4 54988108 54989596 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g04527 175 285 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G33880 69.298 1.96e-45 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mepo4g04527 HLH 1.1e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g04527 - - tpra:123881860 389.423
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo5g00033 5 349375 351349 Mepo4g04527 4 54988108 54989596 PCT