Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g04526 ATGGAACCTGCCCAATTGATTTCTGAAGAGTGGGATTCTCTTAGTGGACAGTACACAGCTGAGGAAGCTGACTTCATGAATCAGTTCCTTAGTGGTAATAAAAATACAAGTTTTGGCATGCCATCTTACTTTCCTCAGGCTGATTTTATGTGTTTCTCCCAAGGGAGTAGCACAAGTACTGATAATAGTGCTAATATCTCTTCTACCACCACTACAAGTAGTGGAACCTACTCGTGTGATTTGGCAACAAACTTTGATTCACTGTCCATGTTTTTTTGTTTGGAAGATGCCAAATTTAGTCCTCAATATTTGCATGATAGCATAAGCAAACACATAAATAATGATAGTATTGATCATAAAGGGTCATGTTTAGAGCCAGTGAAACTGGTTCTTGCTGCTGACAACAATTTGCATGATGAAAGAGAGCATGAAATGATGATGGTTTCTGAACCTTCTTCAGAAGAGGATAGAAGCAAAAACATGGAGAACCCTGCAAAAAGATTTAGGAGCTCAATAGAGGTACAAAAGAACAAGAGAAATGTGAAATCTAGGAAGAAACCAAAGTCGGCGTTCAAAAGCAACACTGGCGAGGATGAAAGTCATGATCTTCAGGAGCAGAATTTGAGCTCAGAGGATGATGATTTCAATGCTTCACAGAAGCTAAATGCAGGAATATCTTCAGTCTTGAACCAGAATGATTCAACAGATTTGAAGTTAAAGGGAAAATCAAGATGTAATGGAGGTTCTGCCTCTGATCCACAAGGTGTCTATGCAAAAAAAAGAAGAGAAAGAATAAATGAAAGGTTGAAAATCCTGCAAAGCCTAGTCCCTAATGGAACCAAGGTGGATATCAGCACCATGCTTGAGGAAGCTGTGCAATATGTGAAGTTTTTACAGGTCCAAATTAAGCTTCTGAGCTCTGATGATCACTGGATGTATGCTCCAATTGCTTACAATGGAATGAATATTGGACTAAACCTCAACATTATCCCAACCGAACTACCATAG 1008 0.3899 MEPAQLISEEWDSLSGQYTAEEADFMNQFLSGNKNTSFGMPSYFPQADFMCFSQGSSTSTDNSANISSTTTTSSGTYSCDLATNFDSLSMFFCLEDAKFSPQYLHDSISKHINNDSIDHKGSCLEPVKLVLAADNNLHDEREHEMMMVSEPSSEEDRSKNMENPAKRFRSSIEVQKNKRNVKSRKKPKSAFKSNTGEDESHDLQEQNLSSEDDDFNASQKLNAGISSVLNQNDSTDLKLKGKSRCNGGSASDPQGVYAKKRRERINERLKILQSLVPNGTKVDISTMLEEAVQYVKFLQVQIKLLSSDDHWMYAPIAYNGMNIGLNLNIIPTELP 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g04526 335 Gene3D - 257 310 IPR036638 GO:0046983
Mepo4g04526 335 SMART finulus 255 304 IPR011598 GO:0046983
Mepo4g04526 335 MobiDBLite consensus disorder prediction 145 215 - -
Mepo4g04526 335 MobiDBLite consensus disorder prediction 145 178 - -
Mepo4g04526 335 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 256 315 IPR036638 GO:0046983
Mepo4g04526 335 MobiDBLite consensus disorder prediction 237 259 - -
Mepo4g04526 335 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 86 307 IPR045843 GO:0003700|GO:0006355
Mepo4g04526 335 FunFam Basic helix-loop-helix transcription factor 250 307 - -
Mepo4g04526 335 Pfam Helix-loop-helix DNA-binding domain 259 299 IPR011598 GO:0046983
Mepo4g04526 335 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 249 298 IPR011598 GO:0046983
Mepo4g04526 335 CDD bHLH_AtIND_like 250 312 - -
Mepo4g04526 335 MobiDBLite consensus disorder prediction 190 208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g04526 Mepo-Chr4 54977799 54984504 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g04526 10 329 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G14760 37.190 7.03e-55 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mepo4g04526 HLH 4.2e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g04526 - - tpra:123881860 333.954
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g04526 4 54977799 54984504 Mepo4g04526 4 54977799 54984504 ECH