Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g04492 ATGGAAGAAAGTGGTAACCTAAAGAAAGGACCATGGAGTAGTGAAGAAGATGAAGTTTTGTTGAAACATGTTGACAAGTACGGTCCTGTGGATTGGAGTTCCATTCGATCCAAAGGTCTTTTGCAACGAACTGCAAAATCTTGTCGGTTTAGATGGGTTAACAGCCTTAGACCCGACTTGAAAAGAGGGTGCAAGTTTTCAGAAGATGAGGAAAGGGTGGTGATTGAATTACAGGAACAATTTGGGAACAAATGGGCGAAAATTGCTACGTATTTGGAAGGGAGAACAGACAATGATGTGAAGAACTTTTGGAGTGGCAGGAGAAAAAGGATGGAGAGGACATTTCCAAGGACATCATCACCACCATCAAAGCAGCAGAAAAACAAAGGAAAAGTTTTACTTAATGAAGTCAAGGTTCATAAGGTTCCTGAATGTGGTTCCAATCAGCTAGTGGAAGACAAAGAAGTGTTGAAGATGGTCAACCTTTCAGATTTGACAAAGCCAAACTACCAAAATTCGGAAAGTGAACTTAGTGCAGTTGAGGTTGAGGCTACTCCACTTCACACAGTACCATCATTTGAGTCTTCATCAGGGTACAACTTTCCTATACACCCTGAATCACAAATGAACTTTCCACTGTTCCCAGAGTGTCAGGATCTTGATCAAGAGCCCTATGATCCCAATTTTATGGATATGTTTGAGCAGAGAAAATGTTCAGAATATGTGTGGAGCCAGAAGCTTGAGACTCAATTGCCAACTTTTGGACTTGAGGAAAATTCTCTTACTACAAGTTCAAACCGCTTCTTTAAAGACATCCCAACTGAAGTTTTTGAATATTTTGCTCAATAG 849 0.404 MEESGNLKKGPWSSEEDEVLLKHVDKYGPVDWSSIRSKGLLQRTAKSCRFRWVNSLRPDLKRGCKFSEDEERVVIELQEQFGNKWAKIATYLEGRTDNDVKNFWSGRRKRMERTFPRTSSPPSKQQKNKGKVLLNEVKVHKVPECGSNQLVEDKEVLKMVNLSDLTKPNYQNSESELSAVEVEATPLHTVPSFESSSGYNFPIHPESQMNFPLFPECQDLDQEPYDPNFMDMFEQRKCSEYVWSQKLETQLPTFGLEENSLTTSSNRFFKDIPTEVFEYFAQ 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g04492 282 FunFam MYB transcription factor 9 61 - -
Mepo4g04492 282 FunFam Transcription factor GAMYB 64 134 - -
Mepo4g04492 282 SMART sant 8 58 IPR001005 -
Mepo4g04492 282 SMART sant 62 110 IPR001005 -
Mepo4g04492 282 SUPERFAMILY Homeodomain-like 6 104 IPR009057 -
Mepo4g04492 282 CDD SANT 65 104 IPR001005 -
Mepo4g04492 282 CDD SANT 11 56 IPR001005 -
Mepo4g04492 282 Gene3D - 2 62 - -
Mepo4g04492 282 ProSiteProfiles Myb-like domain profile. 65 104 IPR001005 -
Mepo4g04492 282 Gene3D - 64 138 - -
Mepo4g04492 282 PANTHER TRANSCRIPTION FACTOR DUO1 3 280 - -
Mepo4g04492 282 Pfam Myb-like DNA-binding domain 65 104 IPR001005 -
Mepo4g04492 282 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 61 112 IPR017930 -
Mepo4g04492 282 ProSiteProfiles Myb-like domain profile. 4 56 IPR001005 -
Mepo4g04492 282 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 60 IPR017930 -
Mepo4g04492 282 Pfam Myb-like DNA-binding domain 12 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g04492 Mepo-Chr4 54692110 54694087 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g04492 7 115 MYB Transcription Factor Family AT3G60460 77.064 7.28e-59 188
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mepo4g04492 Myb_DNA-bind_6 1.1e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g04492 K09422 - gmx:100793689 371.318