Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g04478 ATGTTTGAAGCTGATAATGGAGAATATGTTGATGGAGATGAAGATGAAATTACAATTGTTGAGTCATTTCAATTTAACTTTGATACCATACGAGCTGCTACAAGTGACTTCTCTGATTCTAATAAACTCGGGCAAGGTGGATTTGGAATTGTTTATCGGGGTAAACTTCCTGATGGACAAATGGTTGCTGTCAAAAGATTGTTAAAAGATTCCAGCCAAGGAGATGTGGAATTTAAAAATGAAGTACTATTAGTAGACAAGCTTCAACATCGAAATTTGGTTAGGCTACTTGGTTTCAGTTTAGAAGGGAGTGAAAAACTTCTTATTTATGAATTTGTTACAAATAAAAGTCTTGATTACTTCATATTTGATCCAACCAGAAAAGCACAACTGAATTGGCAAAAGCGCTACGATATTATAAGAGGTATTGCTCGAGGTCTTCTTTATCTTCATGAGGATTCTCGCCTACGAATTATACACCGTGATATCAAAGCAAGCAACATTCTCTTAGACGACGAGATGAATCCTAAGATATCTGATTTTGGATTGGCAAGATTGTTTGTTATAGATCAATCTGAAGAAAATACAGATCGAATTGTTGGAACTTACGGATACATGGCACCTGAGTATGCAATGCATGGACAATTTTCGAGATCAAAGCAGTTCGCTCTCGAAGCTGTCCGCCAATTGAAATATTCAACACCTAAACCTATCCTCCCTACTTCTTCCCTTGATATATTCTTTTTCACAACACTTGAAAGGGCAAATCACGAACTGTCCTTGCCACCACAGTGCCGATTGAGAAAGCAAAAACGCAATTTTGAAGCCAACATGGAAAAATTTGATGACGAAGGTGAAGAGGAAATGACGATTGCTGAGTCATTGCAATTTAACTTTGATATCATACGAATGGCTACAAGTGATTTCTCCAATTCTAATAAACTTGGGCAAGGTGGATTTGGAATTGTTTATCGGGGTAAACTGGCTAGTGGACAAATGATTGCTGTTAAGAGGTTGTCAACAAATTCTGACCAAGGAGATGTGGAGTTTAAAAATGAAGTAATTTTAGTAGCCAAACTTCAACATCGAAATCTGGTTAGGCTACTTGGTTTCAGTATAAAAGGGAGAGAAAGACTACTTATTTATGAATTTGTTTCAAATAAAAGTCTTGATTTCTTCATATTTGATTCAACAAGGAAAGCACAATTGAATTGGGAAAAGCGCTACAATATCATAAAAGGTATTGCTCGTGGACTTCTTTACCTTCACGAGGATTCTCGCTTGCGGATTATACACTGTAATCTCAAAACAAGTAATATTCTCTTAGACGATGAGATGAATCCTAAGATATCTGATTTTGGATTAGCGAGACGGTTTGTTATCGGTCAAACTGAAGAAAGTACAAATAGAATCGTTGGAACTTAG 1425 0.3642 MFEADNGEYVDGDEDEITIVESFQFNFDTIRAATSDFSDSNKLGQGGFGIVYRGKLPDGQMVAVKRLLKDSSQGDVEFKNEVLLVDKLQHRNLVRLLGFSLEGSEKLLIYEFVTNKSLDYFIFDPTRKAQLNWQKRYDIIRGIARGLLYLHEDSRLRIIHRDIKASNILLDDEMNPKISDFGLARLFVIDQSEENTDRIVGTYGYMAPEYAMHGQFSRSKQFALEAVRQLKYSTPKPILPTSSLDIFFFTTLERANHELSLPPQCRLRKQKRNFEANMEKFDDEGEEEMTIAESLQFNFDIIRMATSDFSNSNKLGQGGFGIVYRGKLASGQMIAVKRLSTNSDQGDVEFKNEVILVAKLQHRNLVRLLGFSIKGRERLLIYEFVSNKSLDFFIFDSTRKAQLNWEKRYNIIKGIARGLLYLHEDSRLRIIHCNLKTSNILLDDEMNPKISDFGLARRFVIGQTEESTNRIVGT 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g04478 474 ProSitePatterns Protein kinases ATP-binding region signature. 315 337 IPR017441 GO:0005524
Mepo4g04478 474 Pfam Protein kinase domain 310 473 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g04478 474 Pfam Protein kinase domain 38 214 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g04478 474 ProSitePatterns Protein kinases ATP-binding region signature. 43 65 IPR017441 GO:0005524
Mepo4g04478 474 Gene3D Phosphorylase Kinase; domain 1 283 384 - -
Mepo4g04478 474 SMART serkin_6 37 393 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g04478 474 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 20 218 - -
Mepo4g04478 474 FunFam Cysteine-rich receptor-like protein kinase 10 268 384 - -
Mepo4g04478 474 FunFam cysteine-rich receptor-like protein kinase 10 113 227 - -
Mepo4g04478 474 FunFam Cysteine-rich receptor-like protein kinase 10 3 112 - -
Mepo4g04478 474 SUPERFAMILY Protein kinase-like (PK-like) 290 474 IPR011009 -
Mepo4g04478 474 Gene3D Phosphorylase Kinase; domain 1 9 112 - -
Mepo4g04478 474 SUPERFAMILY Protein kinase-like (PK-like) 25 218 IPR011009 -
Mepo4g04478 474 Gene3D Transferase(Phosphotransferase) domain 1 385 474 - -
Mepo4g04478 474 Gene3D Transferase(Phosphotransferase) domain 1 113 247 - -
Mepo4g04478 474 ProSiteProfiles Protein kinase domain profile. 37 393 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g04478 474 ProSitePatterns Serine/Threonine protein kinases active-site signature. 158 170 IPR008271 GO:0004672|GO:0006468
Mepo4g04478 474 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 385 474 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g04478 Mepo-Chr4 54556633 54562596 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g04478 269 474 Receptor kinase-like Gene Family AT4G23230 61.165 3.19e-80 259
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mepo4g04478 Pkinase 1.8e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g04478 - - egt:105968348 489.189