Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g04477 ATGATATATGAAGAAAGCTTCTATGATCCTACACCTGCAATAGACCCAGGTGAAACCTTCCCATCAGAAGAAGAAAAAAGCAAATCATCACATACTACCATCGCCATAGTTGTGCCGACTGTTGTTGTTGTTGTTGCCGCCCTGCTAATTTTTATTTGCATATGCTTAAGGAAAAGGAAGGCAAGGATAAATCTCGAAGAAATCGAAGAAGATGACAATGAGGATATTGATATGGCTGAGTCATTGCAATTCAACTTCGAGACATTACAAGTTGCTACAAGTAACTTTTCTGAAGCTAACAAACTTGGACATGGCGGATTTGGAGTTGTTTATCAGGGTATCCTCTCTGGTGGACAAGTCATTGCGGTCAAAAGGTTATCAACAAATTCAGGACAGGGGGATGTTGAATTTAAGAATGAAGTGCTTTTAGTCGCTAAGCTTCAACATCGAAATTTAGTTCGACTACTTGGTTTTTGTCTAGAAGGAAGAGAAAGATTGCTTGTTTATGAATATGTTCCGAATAAAAGTCTTGATTATTTTATATTTGATCCAATAAAGAAAGCACAATTGGATTGGGAAAGGCGCTATAAAATCATTGGAGGTATTGCTAGAGGCCTTCTTTACCTTCACGAGGATTCTCAACTTCGTATTATACATCGTGATCTTAAAGCAAGTAACATTCTCTTAGACGAAAAGTTGAATCCTAAAATATCAGATTTTGGTATGGCCAGACTACTTCTTGTTGATGAAACTCAAGTAAATACAAATAAAATCGTTGGAACATATGGATATATGGCTCCTGAGTATGCAATGTTTGGAGAATTTTCGGTAAAATCAGATGTTTTTAGTTTTGGTGTACTAGTTTTGGAGATTATAAGTGGCCAGAAAGCTTGTCGCGTTCTTCATGGGCAGAATCTGGAGGATCTACTTAGCTTTTTAGTCGTTGTAGACTTGTTTGTTGGTGTTACTTTACTATTGGTAATCTTTGAAATGTCTCCTTTTACAGAAAAAAGCAAATCATCACATACTACCATTGCCATAGTTGTGCCGACTGTTGTTGTTGTTGTTGCCGCCCTGCTAACTTTCATTTGCATATGCTTAAGGAAAAGGAAGGCAAAGATAAATCTCGAAGAAATAGAAGAAGATGATAATGATGATATTGACATGGCTGAGTCATTGCAATTCAACTTCGAGACATTACGAGTTGCTACAGGTAACTTTTCTGAAGCTAATAAACTTGGACATGGCGGATTTGGAGTTGTTTATCAGGGTATACTCGCCGGCGGACAGGTGATTGCGGTCAAAAGGTTGTCAACAAATTCAGGACAAGGGGATATTGAATTTAAGAATGAAGTGCTTTTAGTGGCTAAGCTTCAACATCGAAATTTAGTTAGACTACTTGGTTTTTGTCTAGAAGGAAGAGAGAGATTGCTTGTCTATGAATATGTTCCGAATAAAAGTCTTGATTATTTTATATTTGATCCAATAAACAAAGCACAATTGGATTGGGAAAGGCGCTACAAAATCATTGGAGGTATTGCTAGAGGCCTTCTTTACCTTCATCAGGATTCTCAACTTCGTATTATACACCGTGATCTTAAAGCGGGTAACATTCTCTTAGACGAAAAGTTGAATCCTAAAATATCAGATTTTGGTATTGCCAGACTACTTCTTGTCGATCAAACTCAAGTAAATACAAATAAAATCGTTGGAACATATGGATATATGGCTCCTGAGTATGTAATGTTTGGAGAATTTTCGGTAAAATCAGATGTTTTCAGTTTTGGTGTACTAGTTTTGGAGATTATAAGTGGCCAGAAAGCTTGTTGCGTTCTTCATGGGCAGAGTCAGGAGGATTTACTTAGCTTTAATTTAAGGGGAGATGCGACATTATTTGAACCAATGAACAAGGCAACACGGCCAAACAGTACCCCACCATGA 1941 0.3735 MIYEESFYDPTPAIDPGETFPSEEEKSKSSHTTIAIVVPTVVVVVAALLIFICICLRKRKARINLEEIEEDDNEDIDMAESLQFNFETLQVATSNFSEANKLGHGGFGVVYQGILSGGQVIAVKRLSTNSGQGDVEFKNEVLLVAKLQHRNLVRLLGFCLEGRERLLVYEYVPNKSLDYFIFDPIKKAQLDWERRYKIIGGIARGLLYLHEDSQLRIIHRDLKASNILLDEKLNPKISDFGMARLLLVDETQVNTNKIVGTYGYMAPEYAMFGEFSVKSDVFSFGVLVLEIISGQKACRVLHGQNLEDLLSFLVVVDLFVGVTLLLVIFEMSPFTEKSKSSHTTIAIVVPTVVVVVAALLTFICICLRKRKAKINLEEIEEDDNDDIDMAESLQFNFETLRVATGNFSEANKLGHGGFGVVYQGILAGGQVIAVKRLSTNSGQGDIEFKNEVLLVAKLQHRNLVRLLGFCLEGRERLLVYEYVPNKSLDYFIFDPINKAQLDWERRYKIIGGIARGLLYLHQDSQLRIIHRDLKAGNILLDEKLNPKISDFGIARLLLVDQTQVNTNKIVGTYGYMAPEYVMFGEFSVKSDVFSFGVLVLEIISGQKACCVLHGQSQEDLLSFNLRGDATLFEPMNKATRPNSTPP 646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g04477 646 ProSitePatterns Protein kinases ATP-binding region signature. 102 124 IPR017441 GO:0005524
Mepo4g04477 646 Gene3D Phosphorylase Kinase; domain 1 58 171 - -
Mepo4g04477 646 Pfam Protein kinase domain 408 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g04477 646 Gene3D Phosphorylase Kinase; domain 1 384 482 - -
Mepo4g04477 646 Gene3D Transferase(Phosphotransferase) domain 1 483 642 - -
Mepo4g04477 646 Gene3D Transferase(Phosphotransferase) domain 1 172 383 - -
Mepo4g04477 646 ProSiteProfiles Protein kinase domain profile. 96 387 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g04477 646 FunFam cysteine-rich receptor-like protein kinase 10 483 639 - -
Mepo4g04477 646 ProSitePatterns Serine/Threonine protein kinases active-site signature. 528 540 IPR008271 GO:0004672|GO:0006468
Mepo4g04477 646 MobiDBLite consensus disorder prediction 1 26 - -
Mepo4g04477 646 ProSiteProfiles Protein kinase domain profile. 407 646 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g04477 646 Pfam Protein tyrosine and serine/threonine kinase 99 299 IPR001245 GO:0004672|GO:0006468
Mepo4g04477 646 ProSitePatterns Protein kinases ATP-binding region signature. 413 435 IPR017441 GO:0005524
Mepo4g04477 646 SUPERFAMILY Protein kinase-like (PK-like) 391 633 IPR011009 -
Mepo4g04477 646 ProSitePatterns Serine/Threonine protein kinases active-site signature. 217 229 IPR008271 GO:0004672|GO:0006468
Mepo4g04477 646 FunFam Cysteine-rich receptor-like protein kinase 10 57 171 - -
Mepo4g04477 646 SMART serkin_6 96 387 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g04477 646 SMART serkin_6 407 644 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g04477 646 FunFam Cysteine-rich receptor-like protein kinase 10 368 482 - -
Mepo4g04477 646 FunFam cysteine-rich receptor-like protein kinase 10 172 350 - -
Mepo4g04477 646 SUPERFAMILY Protein kinase-like (PK-like) 80 313 IPR011009 -
Mepo4g04477 646 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 33 298 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g04477 Mepo-Chr4 54529879 54548103 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g04477 339 626 Receptor kinase-like Gene Family AT4G23230 60.069 4.72e-114 353
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mepo4g04477 Pkinase 1.4e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g04477 - - var:108324785 411.764