Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g04476 ATGTCTTGTATAATGTTTGAAGAAATAGAAGATGACAGTGACTATATTGAAATTGCCGAGTCATTGCAATTCAACTTCGACACAATACGAGTTGCTACAAGTAACTTTTCTGATGATAATGAACTTGGACGTGGAGGATTTGGAGTTGTTTATCAGGTAAATAACACTACTGATTTAGATGCACATAACGTTCTTCATCAACAAAGTATTTATTATTACACAAATGAGATATATTTGCAGGGTAGGCTCCCCAATGGACAAGTGATTGCGGTCAAAAGGTTGTCAAGAGATTCTGGACAGGGTGATATTGAATTTAAGAATGAAGCGCAATTAGTGGCTAAGCTTCAACACCGAAATTTAGTTAGACTACTTGGTTTTTGTCTCGAAGGAAGAGAAAGACTACTTGTCTATGAATTTGTTCCCAATAAAAGCCTTGATTACTTTATATTTGATCCAATAAAGAAAGAACAATTAGATTGGGAAAGGCGCTACAAAATCATTGAAGGTATTGTTAGAGGCCTTCTTTACCTTCATCAGGATTCTCAACTTCGCATTATACATCGTGATCTTAAAGCAAGTAACATTCTCTTGGATGAAAAGATGAATCCTAAAATATCAGATTTTGGTATGGCCAGACTAATTCTTGTGGATCAAACTCAAGTAAATACAGATAAAGTCGTTGGGACATATGGATATATGGCACCCGAATATGCAATGTTTGGACAATTTTCGGTCAAAACAGATGTTTTTAGTTTTGGCGTACTAGTTCTAGAGATTATCAGTGGGCAAAAGATCAGTGATATACTTCATGGACAGAGTCAGGAGGATTTACTTAGCTTTGTTCTGAAAAGAAATCTCTTGAACTGGCTTGATCCAACCCAATATATTGGAATTGTTCCAGATGATTATCTAAATGCTTGTCCGCAAGATGGCGATTCCGAAGCTGCTGCCATTGCCAATTCTTTTCTTCATCTGAAGTTGTTAGAGATTAAATTCTCCAAGTGGCCAAAGGACTCAATTGCGTCGTCCTATTTGTTGGAGTTGAGAGACATTGAAAAGCCAAATTCCTATTATCCAAAGTTTTCATCTTTCTTTCATGGTGAAAGTTATGGACATTAG 1119 0.3628 MSCIMFEEIEDDSDYIEIAESLQFNFDTIRVATSNFSDDNELGRGGFGVVYQVNNTTDLDAHNVLHQQSIYYYTNEIYLQGRLPNGQVIAVKRLSRDSGQGDIEFKNEAQLVAKLQHRNLVRLLGFCLEGRERLLVYEFVPNKSLDYFIFDPIKKEQLDWERRYKIIEGIVRGLLYLHQDSQLRIIHRDLKASNILLDEKMNPKISDFGMARLILVDQTQVNTDKVVGTYGYMAPEYAMFGQFSVKTDVFSFGVLVLEIISGQKISDILHGQSQEDLLSFVLKRNLLNWLDPTQYIGIVPDDYLNACPQDGDSEAAAIANSFLHLKLLEIKFSKWPKDSIASSYLLELRDIEKPNSYYPKFSSFFHGESYGH 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g04476 372 Gene3D Transferase(Phosphotransferase) domain 1 140 329 - -
Mepo4g04476 372 SMART serkin_6 36 336 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g04476 372 FunFam Uncharacterized protein 74 139 - -
Mepo4g04476 372 Gene3D Phosphorylase Kinase; domain 1 6 139 - -
Mepo4g04476 372 Pfam Protein tyrosine and serine/threonine kinase 41 264 IPR001245 GO:0004672|GO:0006468
Mepo4g04476 372 ProSiteProfiles Protein kinase domain profile. 36 323 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g04476 372 SUPERFAMILY Protein kinase-like (PK-like) 14 287 IPR011009 -
Mepo4g04476 372 ProSitePatterns Serine/Threonine protein kinases active-site signature. 185 197 IPR008271 GO:0004672|GO:0006468
Mepo4g04476 372 FunFam Lectin-domain containing receptor kinase A4.3 140 290 - -
Mepo4g04476 372 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 16 293 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g04476 Mepo-Chr4 54517355 54520505 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g04476 13 331 Receptor kinase-like Gene Family AT4G11530 54.012 1.95e-106 325
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mepo4g04476 PK_Tyr_Ser-Thr 1.3e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g04476 - - var:108324785 389.037