Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g04475 ATGCTTCTCTTGAGCAATAATAACCAAATAACTACCTTAATCTTTTTTCTGTTTGTATGGCTTGCCTCATCAACATCAACATCATCAGCAGCATCTCCAAATTACAATGATATTTACTGTCCAAACAACAAAACCTATGAACCCAACAGCACAATATTCAACACAAATCTCAATGTAGTCCTCTTCACACTCGTCTCCAATGCCACCCAAGGAGCTGATTCCTACTCCTCCATCATGGGTTTTGGAACCACAAACGCCGTCAACGGTGTTTTCCTCTGCCGTGGTGATGTTTCCTCCACTACATGTCAAGATTGTGTAACCACCGCAGCCACAAATATCACACGCCTTTGTCCTAACCAAACGGAATCAATAATTTGGTACGACGAATGCATGTTGCGTTATACTAGCCGTTACTTTAGCCCCACCAGTCTTGTCCCAAGATTGAATTTGAAGAACAATACAAACATCTCTATTTCTACCCATGATTTGGTTAACTATAACCAACTGTTGTTAAGATTTTTAGGAAGTTTGGCTACAGAAGCTTCGGATTCTCAGACACAGAAGAAATTTGCGACCGGTGAAGAGACCTTCGACTTCAGAGGCTATTCCAAGAAGGTGGTTACAGTTTATGGATTGGCGCAGTGTGTTCCAGGAGTGACGAATGTTCAGTGTGAGGAGTGTTTGGTAAATGTGTTGAGATCTCTTGATACATGTTGCGAAGGGGCTAGAGCTCTGCTTGCGTGGTGTAATATCAGATATGATTTATACCGGTTCTACAATACAACCGGTGGTGATTCAGCTTCGCCACCGGATTCTCCTTCTTCAGGAATGGAAAAGTCCAAGTCAAGAACAAGAACGGTCTTGATTGTTGTCATTGTTACCGGGTCAACAATTCTATTTTGTTTGGGCTGCTATTTCCTCATGAGAAGATCAAGGTGGAAGAAATATAAAACTCTTTTGAGAGAAAATTTTGGCGATGAAAGTGCCATGTTACAATCACTACAGTATAATTTGGCGACCATTGAAGCAGCCACAAAGAAATTTTCACCCGAGAATAAAATTGGCAAGGGAGGATTTGGAGAGGTTTACAAGGGTGTTCTTATAGATGGGAGGCAAATAGCTGTGAAAAAACTTTCTCAAAGTTCAGGACAAGGTTCAGTAGAGTTCAAAAATGAGGTTTTACTGATAGCCAAACTTCAACATAGAAATTTGGTGACTTTAATAGGTTTTTGCTTGGAAGGCCAAGAGAAAATGCTCATTTATGAATACGTGACCAACAAGAGTCTCGATTACTTTCTATTTGATCACAAGAAGTCCAGATTATTACACTGGTTTGAACGTTACAAAATTATCGAAGGAATTGCACATGGAATACATTATCTGCACGATTATTCAAGATTGAAGATTATTCATCGTGATCTCAAACCTAGTAATGTATTGTTAGATGATAACATGAATCCTAAAATATCTGATTTTGGCATGGCAAGATTGGTGGCTTTAGATCAAGATCGAGGAAGTACAAATAGAATTGTTGGAACATATGGCTATATGTCTCAGGAATATGCAATGCATGGACAATTTTCAGAAAAATCAGACGTTTTCAGTTTTGGAGTCATAGTTTTGGAGATAATTAGTTCAAAAAGAAATGCTCGTTCTCTTTTATCAGATAACTCCGATGACCTCTTAAGTCGTGTGAGAGAACCAACTAAATCTATGCATAGTGAAATACTGCAAAATATGGTAGCAGGGGAGTTGAGTTCAGCTTCTATTTCAACAGGCAATGAAATGTATTCATCAGTGGTACCAAGTTCTGCATTCTCTGACAATGCTTAG 1833 0.3906 MLLLSNNNQITTLIFFLFVWLASSTSTSSAASPNYNDIYCPNNKTYEPNSTIFNTNLNVVLFTLVSNATQGADSYSSIMGFGTTNAVNGVFLCRGDVSSTTCQDCVTTAATNITRLCPNQTESIIWYDECMLRYTSRYFSPTSLVPRLNLKNNTNISISTHDLVNYNQLLLRFLGSLATEASDSQTQKKFATGEETFDFRGYSKKVVTVYGLAQCVPGVTNVQCEECLVNVLRSLDTCCEGARALLAWCNIRYDLYRFYNTTGGDSASPPDSPSSGMEKSKSRTRTVLIVVIVTGSTILFCLGCYFLMRRSRWKKYKTLLRENFGDESAMLQSLQYNLATIEAATKKFSPENKIGKGGFGEVYKGVLIDGRQIAVKKLSQSSGQGSVEFKNEVLLIAKLQHRNLVTLIGFCLEGQEKMLIYEYVTNKSLDYFLFDHKKSRLLHWFERYKIIEGIAHGIHYLHDYSRLKIIHRDLKPSNVLLDDNMNPKISDFGMARLVALDQDRGSTNRIVGTYGYMSQEYAMHGQFSEKSDVFSFGVIVLEIISSKRNARSLLSDNSDDLLSRVREPTKSMHSEILQNMVAGELSSASISTGNEMYSSVVPSSAFSDNA 610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g04475 610 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 33 139 - -
Mepo4g04475 610 ProSitePatterns Protein kinases ATP-binding region signature. 354 377 IPR017441 GO:0005524
Mepo4g04475 610 Gene3D Transferase(Phosphotransferase) domain 1 424 600 - -
Mepo4g04475 610 SUPERFAMILY Protein kinase-like (PK-like) 323 564 IPR011009 -
Mepo4g04475 610 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 309 423 - -
Mepo4g04475 610 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 32 571 - -
Mepo4g04475 610 ProSitePatterns Serine/Threonine protein kinases active-site signature. 469 481 IPR008271 GO:0004672|GO:0006468
Mepo4g04475 610 ProSiteProfiles Gnk2-homologous domain profile. 144 258 IPR002902 -
Mepo4g04475 610 Pfam Salt stress response/antifungal 40 135 IPR002902 -
Mepo4g04475 610 Pfam Salt stress response/antifungal 164 255 IPR002902 -
Mepo4g04475 610 ProSiteProfiles Protein kinase domain profile. 348 610 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g04475 610 Pfam Protein tyrosine and serine/threonine kinase 351 550 IPR001245 GO:0004672|GO:0006468
Mepo4g04475 610 Gene3D - 148 258 IPR038408 -
Mepo4g04475 610 Gene3D - 33 139 IPR038408 -
Mepo4g04475 610 ProSiteProfiles Gnk2-homologous domain profile. 34 139 IPR002902 -
Mepo4g04475 610 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 424 515 - -
Mepo4g04475 610 SMART serkin_6 348 601 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g04475 610 Gene3D Phosphorylase Kinase; domain 1 311 423 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g04475 Mepo-Chr4 54513568 54516412 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g04475 16 565 Receptor kinase-like Gene Family AT4G05200 46.491 2.81e-157 466
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mepo4g04475 PK_Tyr_Ser-Thr 1.3e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g04475 - - ccaj:109813299 763.066