Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g04474 ATGCTTTCTTCACGATGGTTTCTGTTTTCACTTCTTCCTTTGTTTTTCACACTAAATTCTGAAGCCAACCAGCAGCTAATTCCCCGCTACTCCGAATGCAATGAAAAACTCGGAAACTTCACCGGAGGTAGTGTATACAAGACCAACCTCGACACTGTTCTGGGAAATATATATACCGACAAAAAAATAGACTATGGATTCTACAATTTCACATATGGTGAAGACCCTGACCAAGTAAATGCAATCGGACTCTGCAGAGGAGACACTACTCCAGAGGAATGTCGTGATTGTCTGAAAACCTGCACAGCACTTCTCACAGATCGGTGTTCAACACAGAAAGAGGCAATTGGTTACTACGACTTGTGCACTTTACGCTATTCAAACGCTTCAATTTTTGGCGTGAATGAACCCGAAACCTCTAAAGTTTACAACATCCAGGAAAAAACAGTGGTGGATAAAGCATTTAATGAAACAGTTAGTGGTTTATTGCAAGAACTTAAAAGCGCGGCTGCGAAAGGTGATTCACGCCACAAGTTTGCTGAAAAAAGTGCTCAAGTAATTGATGAATCAAGTGGTAGTAATAGTAACGAGACTATATATGGTTTGGTTCAGTGTACACCAGATTTGACAGAGCAAAACTGTACTGATTGTTTGGATAGTGCTTACGGACAGATTTCGATTTGGTGTCGAGAAATGAAAGGTTGTTTGTTTCTCGGACCAAGTTGTTCTGTTAGATATGATATCACTCCATTTTTTAAATCCATAGTCAACACACACTCACCAGCACCACAGCCTTCAGAAGCAATTACTCCTGTAGTTCCTCCTAAACCTCCCAAAGGAACAAGCAGGAAATTAAAAACGGCCATCGCTATCGTTGTAGCAGTTGTTGTGGCTGGCATACTAGTTGTGGGTATATGCATTTATTTTGAAAGGAGGAAACCAAGACTCGAATATACGGCTGATTTTGAAGACAAATATAAAAATGAAGATGAATTTGAAGCTGAAGCTGAAGCTGGTAATGACCTTAAAGTTGGCGATTTGTTGCAATTTGACTTTGAAACCATCAGATTAGCTACAAACAACTTCTCTGATGAAAATATGATTGGTCAAGGTGGATTTGGAGCTGTTTATAAGGGTACACTCTCTGATGGACAAGATATTGCTATCAAAAGGTTGGCTAACAATTCTAAGCAAGGAGAAACAGAATTTAAGAACGAAGTGTTGCTGACAGGGAAGCTTCAACATCGAAATTTAGTTAAGCTACTAGGGTTCTGTTTACAAAAAAGAGAAAGACTACTAATTTATGAGTTTGTCTCCAATAAAAGTCTTGATTATATCATATTTGATCCAATCAAGCGTGCAGATTTGAATTGGGAAAGACGCTTCAAAATTATAAAAGATATTGCTCGTGGTCTTCTTTATCTTCACGAAGATTCTCGATTACAAATTGTTCACCGTGATCTCAAAACAAGTAACATTTTACTAGATGATGAGCTGAACCCAAAAATTACAGATTTTGGCATTGCAAAATTGTTTGATGCCAATCAAACTCATGGCATGACAAGTACGGTTATTGGAACTTAG 1584 0.3838 MLSSRWFLFSLLPLFFTLNSEANQQLIPRYSECNEKLGNFTGGSVYKTNLDTVLGNIYTDKKIDYGFYNFTYGEDPDQVNAIGLCRGDTTPEECRDCLKTCTALLTDRCSTQKEAIGYYDLCTLRYSNASIFGVNEPETSKVYNIQEKTVVDKAFNETVSGLLQELKSAAAKGDSRHKFAEKSAQVIDESSGSNSNETIYGLVQCTPDLTEQNCTDCLDSAYGQISIWCREMKGCLFLGPSCSVRYDITPFFKSIVNTHSPAPQPSEAITPVVPPKPPKGTSRKLKTAIAIVVAVVVAGILVVGICIYFERRKPRLEYTADFEDKYKNEDEFEAEAEAGNDLKVGDLLQFDFETIRLATNNFSDENMIGQGGFGAVYKGTLSDGQDIAIKRLANNSKQGETEFKNEVLLTGKLQHRNLVKLLGFCLQKRERLLIYEFVSNKSLDYIIFDPIKRADLNWERRFKIIKDIARGLLYLHEDSRLQIVHRDLKTSNILLDDELNPKITDFGIAKLFDANQTHGMTSTVIGT 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g04474 527 Pfam Salt stress response/antifungal 33 128 IPR002902 -
Mepo4g04474 527 Pfam Salt stress response/antifungal 152 247 IPR002902 -
Mepo4g04474 527 FunFam Os07g0541700 protein 438 527 - -
Mepo4g04474 527 ProSiteProfiles Gnk2-homologous domain profile. 28 131 IPR002902 -
Mepo4g04474 527 SUPERFAMILY Protein kinase-like (PK-like) 347 527 IPR011009 -
Mepo4g04474 527 ProSiteProfiles Protein kinase domain profile. 362 527 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g04474 527 SMART serkin_6 362 525 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g04474 527 Gene3D Phosphorylase Kinase; domain 1 322 437 - -
Mepo4g04474 527 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 24 527 - -
Mepo4g04474 527 FunFam Cysteine-rich receptor-like protein kinase 10 324 437 - -
Mepo4g04474 527 Pfam Protein kinase domain 363 525 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g04474 527 ProSiteProfiles Gnk2-homologous domain profile. 136 251 IPR002902 -
Mepo4g04474 527 Gene3D - 139 251 IPR038408 -
Mepo4g04474 527 Gene3D - 28 130 IPR038408 -
Mepo4g04474 527 ProSitePatterns Serine/Threonine protein kinases active-site signature. 483 495 IPR008271 GO:0004672|GO:0006468
Mepo4g04474 527 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 27 131 - -
Mepo4g04474 527 FunFam Cysteine-rich receptor-like protein kinase 10 138 251 - -
Mepo4g04474 527 ProSitePatterns Protein kinases ATP-binding region signature. 368 390 IPR017441 GO:0005524
Mepo4g04474 527 Gene3D Transferase(Phosphotransferase) domain 1 438 527 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g04474 Mepo-Chr4 54488617 54511205 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g04474 38 527 Receptor kinase-like Gene Family AT4G21410 42.800 1.02e-126 384
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mepo4g04474 Pkinase 9.5e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g04474 - - tpra:123882259 770.77