LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mepo4g04471	ATGTATATCATCAATTCCTCGACAACAACACAATTGATTCTTCTTCTTCTTGCATCCTTGTTAACTTCACTCACCTTTCCATTATCAGCATCTCCAATATACAACTACCACGCTTGCACCGACACCTCATATTACCAACCAAATTCAAATTTCCAAACCACTTTAAAAACCCTTCTCTCTTCACTCGTCAACTCTACCTTACACAACACTTTCTACACCTCCCACATCCCCCTCTTCAATTCCCCCAACGACTTAAAAGGACTCTTCCTCTGCCGCGCCAATGTTACTCCCTCCATCTGTCACCTCTGCGTAACCGCTGCAGCAAATAACATCACAATTCTCTGCAAAAACCAAACAGAGTCTATTATCTGGTACGACCAATGCTTCTTACGTTACTCCAATGATTCCTTCTTGAACCATATGGTTCCAGAAATAACCTTGGATTCAGATGAAAGTCTTCCTGATTCAGAATCTACACAGTTCAGTGATTTTCTTGCAAACTTTTTGAAGGGTTTAGCATATGAAACTGTGAATTCTCCTTCAGGACAGAAATTTGCTGCTAAAGAAGAAAATTTCTTGGGGTCTATGAAGGTTTATTCTTTGGCAGAGTGTACACCTGATTTGTCTATGTTTGAATGTAACACGTGCTTGCAAGGTGCTATTAGTTCTATTGGAAATTGTTATAATGGGAAACGCGGTGCAAGATCACTTCTTCCGAGTTGTAATATTCGATATGAATTTTATCCGTTTTATAACGTTTCTTCTGTTTCTACTCAGCCAAAATTTACCTCTCCGTCTTCAGGAAAGAGCCATGTGCCTTTAATCATTGCGATTAGTGTTCCAACTGCTGTTGTTATGGCACTTCTCATTGTCGGCTTCTACTTCCTGCATAAGAGGTCAATCAAGAAGTATGAGTATAGTAATACATTTGTCCAGGATTCATCTTCAATTCGGAGGGAAGATCTTACAGATATAGATTGTTTGCAATTTGACTTTGCCACAATTGAAGCCACCACAAACTGTTTCTCTGATGAGAACAAGATTGGCCAAGGTGGATTTGGTGTGGTTTATAAGGGTGTCCTTCCTAACGGACTAGAGATAGCTGTAAAGAGGTTGTCGGTAACCTCCTTGCAGGGAGCAATAGAGTTCAGGAATGAAGCTTCCCTTGTGGCCAAGCTTCAACATAGAAATTTAGTGAGAATGTTTGGATTTTGTATGGAGGGGAGGGAAAAGATGCTTGTTTATGAATACATACCAAACAAAAGCCTTGATCACTTTCTATTCGATCCTTCAAAGCAAAGGGAGTTAGACTGGTCAAGTCGCTATAAGATTATAGTTGGCATCGCTCGAGGGATTCTTTATCTACACGAAGACTCCCAACTTAGAATTATTCATCGTGATCTCAAAGCTAGCAATGTTCTATTAGATGAAAATATGAACCCAAAGGTTTCAGATTTTGGAATGGCAAAAATTTTCCAGCCAGATCAGACTCAAGTAAATACAGGAAGGATAGTGGGGACTTACGGCTACATGTCTCCAGAATATGCAATGCGTGGACAGTTCTCTGTGAAGTCAGATGTGTTTAGCTTCGGTGTCTTGGTTTTGGAAATTGTTAGTGGCAAGAAGAATACCGATTTAAATCAATGGAATCAAGCTGATGACCTCTTAAGCTACGCTTGGAAAAAATGGTCAGAGCAAACACCTCTGGAGTTACTGGATCCAACACTTAGAGACTCTTATTCAAGAAATGAAGTTATGAGATGCATCCATATTGGTTTGTTGTGTGTTCAGGAAAGTCCATATGACAGGCCATCCATGGAAACTATTGCACTTATGCTCAACAGTTATTCAGTTACCTTGTCATTACCTCGACAACCACCGTCTTTCCTGCGTGGAAGAACAGCTGACAGAATAAATCAAGGGCTTGATTCTGATCAGTCTACCACAATTCCATGGTCTGTGAATGAAGGAACCATTACCGAAGTATACCCTAGATAA	1998	0.4019	MYIINSSTTTQLILLLLASLLTSLTFPLSASPIYNYHACTDTSYYQPNSNFQTTLKTLLSSLVNSTLHNTFYTSHIPLFNSPNDLKGLFLCRANVTPSICHLCVTAAANNITILCKNQTESIIWYDQCFLRYSNDSFLNHMVPEITLDSDESLPDSESTQFSDFLANFLKGLAYETVNSPSGQKFAAKEENFLGSMKVYSLAECTPDLSMFECNTCLQGAISSIGNCYNGKRGARSLLPSCNIRYEFYPFYNVSSVSTQPKFTSPSSGKSHVPLIIAISVPTAVVMALLIVGFYFLHKRSIKKYEYSNTFVQDSSSIRREDLTDIDCLQFDFATIEATTNCFSDENKIGQGGFGVVYKGVLPNGLEIAVKRLSVTSLQGAIEFRNEASLVAKLQHRNLVRMFGFCMEGREKMLVYEYIPNKSLDHFLFDPSKQRELDWSSRYKIIVGIARGILYLHEDSQLRIIHRDLKASNVLLDENMNPKVSDFGMAKIFQPDQTQVNTGRIVGTYGYMSPEYAMRGQFSVKSDVFSFGVLVLEIVSGKKNTDLNQWNQADDLLSYAWKKWSEQTPLELLDPTLRDSYSRNEVMRCIHIGLLCVQESPYDRPSMETIALMLNSYSVTLSLPRQPPSFLRGRTADRINQGLDSDQSTTIPWSVNEGTITEVYPR	665

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mepo4g04471	665	Pfam	Protein tyrosine and serine/threonine kinase	345	610	IPR001245	GO:0004672\|GO:0006468
	Mepo4g04471	665	Pfam	Salt stress response/antifungal	39	134	IPR002902	-
	Mepo4g04471	665	Pfam	Salt stress response/antifungal	157	247	IPR002902	-
	Mepo4g04471	665	CDD	STKc_IRAK	348	614	-	-
	Mepo4g04471	665	ProSiteProfiles	Gnk2-homologous domain profile.	33	137	IPR002902	-
	Mepo4g04471	665	FunFam	cysteine-rich receptor-like protein kinase 10	418	620	-	-
	Mepo4g04471	665	Gene3D	-	149	250	IPR038408	-
	Mepo4g04471	665	Gene3D	-	33	137	IPR038408	-
	Mepo4g04471	665	FunFam	Cysteine-rich receptor-like protein kinase 10	303	417	-	-
	Mepo4g04471	665	ProSiteProfiles	Protein kinase domain profile.	342	617	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mepo4g04471	665	FunFam	Cysteine-rich receptor-like protein kinase 10	144	250	-	-
	Mepo4g04471	665	Gene3D	Phosphorylase Kinase; domain 1	304	417	-	-
	Mepo4g04471	665	SUPERFAMILY	Protein kinase-like (PK-like)	328	636	IPR011009	-
	Mepo4g04471	665	ProSitePatterns	Protein kinases ATP-binding region signature.	348	370	IPR017441	GO:0005524
	Mepo4g04471	665	PANTHER	PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA	38	661	-	-
	Mepo4g04471	665	SMART	serkin_6	342	617	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mepo4g04471	665	Gene3D	Transferase(Phosphotransferase) domain 1	418	621	-	-
	Mepo4g04471	665	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	463	475	IPR008271	GO:0004672\|GO:0006468
	Mepo4g04471	665	ProSiteProfiles	Gnk2-homologous domain profile.	141	250	IPR002902	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mepo4g04471	Mepo-Chr4	54452797	54456216	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mepo4g04471	28	665	Receptor kinase-like Gene Family	AT4G05200	46.747	0.0	607

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_DLSV	Mepo4g04471		PK_Tyr_Ser-Thr	1.4e-48	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mepo4g04471	-		-	cam:101512516	1008.44