Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g04445 ATGCAAGACTTCTTCGGTTCAATTCGCCGATCCATTGTCTTCTCAACTCCACCTTCCGCCGACGATGGACGCTTCACCGGTTTTGCCAACAAGATCGGCTCCGCCATTCGCAAATCCAGAATCGGCAGCCTCAAATCTCCTCCTCCACCTCCGCCAATTCGGTGGCGTAAAGGCGAGTTGATTGGTTCCGGTGCCTTTGGGAGGGTCTACATGGGCATGAACCTTGATTCCGGAGAGCTTATTGCCGTTAAACAGGTTTTGATTGAGCCTGGTATTGCCTTCAAAGAGAATACAAAGGCTAATATTCGGGAGCTCGAAGAAGAAGTGAAGCTTCTCAAGAATCTTAAGCATCCAAATATTGTTAGATACTTGGGAACTGCAAGAGAGGAAGATTCCTTAAATATTCTGTTGGAGTTTGTACCTGGTGGATCTATCTCATCACTATTGGGGAAATTCGGATCCTTCCCTGAGTCGGTTATCAGAACGTATACAAAACAGCTTTTAGATGGTCTTGAATACCTTCACAATAACCGAATTATTCACAGGGATATCAAGGGTGCAAACATTCTAGTTGATAACAAAGGGTGTATTAAACTCGCAGACTTTGGTGCATCCAGAAAAGTAGTGGAATTGGCTACCATAAATGGAGCAAAATCTATGAAGGGTACCCCACACTGGATGTCACCTGAAGTTATTTTACAGACAGGATATACAACCTCTGCTGATATATGGAGTGTTGCATGCACTGTGATAGAGATGGCCACAGGAAAGCCTCCATGGAGTCAACAGTATCCCCAGGAGGTTTCGGCTCTTTTCTACATTGGAACAACTAGAGATCATCCACCCATACCTGAACATCTGTCTACTGAGGCAAAGGACTTTTTGCTCAAATGCTTTCACAAGGAACCAAATTTAAGACCTTCTGCATCAGACTTGTTACTGCATCCATTCATCACCTGCGAGTATCAGGAATCTCGTTCAATATCACGCAGTTCAATCAGGGACTCTTGCAATCAGATGATACCAAATGGGCTGAACACTAGAAACTTTTTGGAGTCTATCCAAGGATCAACTTGCACAGGCCTAAAGGATGTTTGTCAGACGGATAGTTTAAGGTTCTCGACTGTATATCATTCAAATTCCAATTCAAATCTTTTAAAAGCAGGTTCCTACCAGGGAGCAGACAACAATGATGATGACATGTGTCAAATAGATGATAAAGATGATTTTTTGGTTGATTCATCAGTAAAATCTAAATCCCTACTCGCTGCTGACGACATAAAGAGTTTCAATCCAATGTCCGAGCCTCTGGAGGATGACTGGCCTTGCAAGTTTGATGAAAATCTGAATTTGAAGAAAAGCAGACTGAACTTGTCCCCAGATCAAACTACTATGAAAACTATGAGTCCCGCACCATCTCCTAATGCAGAGAATGAGTTCTCATTTTCAAGTGAACCTCTTGCGGTTGAAGATGATGATGAAGTCACAGAATCCAAAATTAGAGCTTTCCTGGATGATAAGGCCTTTGAATTGGAGAAGCTCCAAACACCTCTTTATGAAGAATTCTTTGGCAAATCAAATGCAACCATTCCTCCTGCGCCTTTTGCAGTTACTCAAAGTAAAGTTATTTCTGATGTCTCAAATGTAACATCAAAAAGCAGGTCTCCAAGTCAAACTAGACGACGATTCTCAATGGCTAGCATTGCCAATATAACAAGCCCGGAGAGTCAAAGAAAATATATTACGAAACTTAATGGTGCGACTTCTCATTGTAGACCTTTGCAGGAAGTTCAGCCATCCGAGCTCAATGAATCAAAGGAGGCTCTTCATGATGCTGAGCTGGGATCAAATGTTAACTCAAGCTTCTCTGAGAGACAAAGGAAATGGAAAGAAGAACTTGCCGAAGAGCTCGAGCGGACGCGAGAGGTGATGCGTCAAACAGGTGGAGGGAAGATAACGTCCCCAAAGGAACGCAATTTTCTCAGAGACTGA 1992 0.4292 MQDFFGSIRRSIVFSTPPSADDGRFTGFANKIGSAIRKSRIGSLKSPPPPPPIRWRKGELIGSGAFGRVYMGMNLDSGELIAVKQVLIEPGIAFKENTKANIRELEEEVKLLKNLKHPNIVRYLGTAREEDSLNILLEFVPGGSISSLLGKFGSFPESVIRTYTKQLLDGLEYLHNNRIIHRDIKGANILVDNKGCIKLADFGASRKVVELATINGAKSMKGTPHWMSPEVILQTGYTTSADIWSVACTVIEMATGKPPWSQQYPQEVSALFYIGTTRDHPPIPEHLSTEAKDFLLKCFHKEPNLRPSASDLLLHPFITCEYQESRSISRSSIRDSCNQMIPNGLNTRNFLESIQGSTCTGLKDVCQTDSLRFSTVYHSNSNSNLLKAGSYQGADNNDDDMCQIDDKDDFLVDSSVKSKSLLAADDIKSFNPMSEPLEDDWPCKFDENLNLKKSRLNLSPDQTTMKTMSPAPSPNAENEFSFSSEPLAVEDDDEVTESKIRAFLDDKAFELEKLQTPLYEEFFGKSNATIPPAPFAVTQSKVISDVSNVTSKSRSPSQTRRRFSMASIANITSPESQRKYITKLNGATSHCRPLQEVQPSELNESKEALHDAELGSNVNSSFSERQRKWKEELAEELERTREVMRQTGGGKITSPKERNFLRD 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g04445 663 MobiDBLite consensus disorder prediction 609 628 - -
Mepo4g04445 663 ProSitePatterns Protein kinases ATP-binding region signature. 61 84 IPR017441 GO:0005524
Mepo4g04445 663 SUPERFAMILY Protein kinase-like (PK-like) 54 319 IPR011009 -
Mepo4g04445 663 CDD STKc_MAPKKK 54 318 - -
Mepo4g04445 663 ProSitePatterns Serine/Threonine protein kinases active-site signature. 179 191 IPR008271 GO:0004672|GO:0006468
Mepo4g04445 663 MobiDBLite consensus disorder prediction 640 663 - -
Mepo4g04445 663 FunFam Mitogen-activated protein kinase kinase kinase 2 54 346 - -
Mepo4g04445 663 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 45 331 - -
Mepo4g04445 663 Coils Coil 95 115 - -
Mepo4g04445 663 FunFam Serine/threonine-protein kinase STE11 52 145 - -
Mepo4g04445 663 ProSiteProfiles Protein kinase domain profile. 55 318 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g04445 663 Pfam Protein kinase domain 56 318 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g04445 663 Gene3D Transferase(Phosphotransferase) domain 1 54 345 - -
Mepo4g04445 663 MobiDBLite consensus disorder prediction 461 480 - -
Mepo4g04445 663 SMART serkin_6 55 318 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g04445 Mepo-Chr4 54221953 54228229 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g04445 1 653 MAP Kinase Kinase Kinase AT3G06030 54.545 0.0 652
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Mepo4g04445 Pkinase 2.3e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g04445 - K20606 gmx:100795863 892.108