Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g04429 ATGGTCCTCTGGGTTTTGAAGAAAGAATGCAATGTTGTTGTTGGAGATTCTGGATGCGAAAAATGCCTCAAAATAGCAACTAATCAATTACCATCTTGCTGTAGTGGAAAACAAGGTGCAAGAGTTCTTATTCCTAGTTGTAATATTAGGTATGAGTTTTATCCATTTTATCATGAGTTGAATGTGCCTGCTCCAGATGAAGCGAGGCCAAATCCACAAGGAAAAAAATCACGGAACTCAATAGTGTTAATTGTTGCTATAGTAGCTCCTATTGTGATCATTTTGTTGCTTACGTTGTTTGTCTGCTGGATCATATCCGAAAAGAAAAGAATAAAGTTCAACTCAGTGCCTGAAGAAAATGTTGAAATCTCCAGGGTAGAATTCTTGCAATTTGATTTCGATACTATCGCAGTGGCCACAAACAACTTCAGTGGTGACAATAAATTAGGGGAAGGAGGATTTGGCGAGGTTTACAAGGGTATGCTATTTAATGGACAAGAGATTGCTGTGAAGAGGCTATCAAGAAGTTCTGGTCAAGGCATAGTAGAATTCAAGAATGAGGTGGTTTTGGTAGCCAAACTACAATACATAAATCTTGTTAGGATTCTTGGGTTTGACTTGGATGGTGAAGAAAAGATGCTCATTTATGAATTCATGTCCAACAAAAGTCTAGACTATTTTCTATTTGATCCGGAAAAAGCACATCAGATAAATTGGCCAAGACGATACAAGATAATAGAAGAAATTGCACGAGGAATGCTTTATCTTCACGAAGATTCTCGACTTAGAATCATACATTGCGATCTTAAAGCTAGTAATATATTATTGGTTGATAATTTAAATCCTAAAATTTCAGATTTTGGGATGGCAAGAATGTTTGGTGTTGATCAAACCCGAGGAATCACAAACAGAGTTGTTGGAACATTATCAAAGACCATCCATGCAGACAGTAGTTTTACTCTTGAACCACCTCAACGACCAGCAGGTTATATTAGTAGCAAAACTGATCAAAGCTTTGCAACAAAAGATTCTGATCGCTCAGACAAGTCTACATCTAAAAGCCAATCGGTTGCAGTTTCTGTTGATGATGCATCCATCAATCAGGTGTACCCTCGATAG 1119 0.3753 MVLWVLKKECNVVVGDSGCEKCLKIATNQLPSCCSGKQGARVLIPSCNIRYEFYPFYHELNVPAPDEARPNPQGKKSRNSIVLIVAIVAPIVIILLLTLFVCWIISEKKRIKFNSVPEENVEISRVEFLQFDFDTIAVATNNFSGDNKLGEGGFGEVYKGMLFNGQEIAVKRLSRSSGQGIVEFKNEVVLVAKLQYINLVRILGFDLDGEEKMLIYEFMSNKSLDYFLFDPEKAHQINWPRRYKIIEEIARGMLYLHEDSRLRIIHCDLKASNILLVDNLNPKISDFGMARMFGVDQTRGITNRVVGTLSKTIHADSSFTLEPPQRPAGYISSKTDQSFATKDSDRSDKSTSKSQSVAVSVDDASINQVYPR 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g04429 372 SUPERFAMILY Protein kinase-like (PK-like) 121 309 IPR011009 -
Mepo4g04429 372 Gene3D - 8 56 IPR038408 -
Mepo4g04429 372 ProSiteProfiles Gnk2-homologous domain profile. 1 56 IPR002902 -
Mepo4g04429 372 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 219 310 - -
Mepo4g04429 372 Pfam Protein tyrosine and serine/threonine kinase 146 294 IPR001245 GO:0004672|GO:0006468
Mepo4g04429 372 ProSitePatterns Serine/Threonine protein kinases active-site signature. 264 276 IPR008271 GO:0004672|GO:0006468
Mepo4g04429 372 Gene3D Transferase(Phosphotransferase) domain 1 219 333 - -
Mepo4g04429 372 FunFam Cysteine-rich receptor-like protein kinase 10 106 218 - -
Mepo4g04429 372 ProSitePatterns Protein kinases ATP-binding region signature. 149 171 IPR017441 GO:0005524
Mepo4g04429 372 ProSiteProfiles Protein kinase domain profile. 143 372 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g04429 372 MobiDBLite consensus disorder prediction 323 372 - -
Mepo4g04429 372 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 18 309 - -
Mepo4g04429 372 SMART serkin_6 143 358 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g04429 372 Gene3D Phosphorylase Kinase; domain 1 104 218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g04429 Mepo-Chr4 54098402 54101784 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g04429 9 308 Receptor kinase-like Gene Family AT4G05200 53.185 2.43e-109 333
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mepo4g04429 PK_Tyr_Ser-Thr 1.4e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g04429 - - cit:127900229 367.081