Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g04427 ATGATCCATCAAAAACAAATGCTGCACCACTTCAAAATCTCTACCACTGCCTATGTTTTCTTTTGCTTCACACTAATTATAACCACAAAAACAACTCAAGCAGCTACAGACCCATCCTATATCGTATATCACTGTCCAAACACAACCACTTTTTCTCCAAACACAACCTACCAAAGAAACCTCAACAAACTTCTTTCTCTTCTCTCATCAAATTCCACAAACAAAAATGGCTTCTACTACACCACAGTGGGCGAAAACAACCCCGAAAACACAGTATACGGCGCCTTCCTCTGCCGTGGAGATCTTACACCAAAAGCATGCAATGACTGTGTTTCAGTAGCATCCAAACAAATCCTTCAAAACTGTCCTAGAGAAAAAGAATCAGTTATTTGGTTGGCTGAATGCATGATACGTTACTCAAACCTTTCTTTCTTCAACGTAGCTGCAGAAGTTCCCGTGCTTGCTCTCACGAATACTGGAAGTGTGATGGAGCAGAACCGGTTCATGCAACTTTTAGCGGATACAATGAACACAGCGGTGGTAGAGGCAGTGAAGGGTGGAGGTGACAAGAAGTTTGGAACGAAAAAAGCAAATTTTTCTAGCCTTCAAACTTTGTATACACTTGCACAGTGTACACCGGATTTATCAAATTCAGGATGCGAAAAATGCCTAACAATAGCAACTAATGAACTGCCATCTTGCTGTAGTGGAAAACAAGGTGGAAGAGCACTTATTCCTAGTTGTAATATTAGGTATGAGTTTTATCCCTTTTATCATGAGATGAGTGTTCCTGCTCCAGAAGAACCAAGGCCGAATCCACAAGGAAACAAATCCCGGAACTCACTAGTGATAATTATTGCAATTGTAGCTCCTATTGTGATCATTTTGTTGCTTACATTTTTTGTCTGCTGGACCATATCTGAAAAGAAAAGAATAAAGTTCAACTCAGTGCCTCAAGAAAGTGTTGAAATCTCTAGGGTAGAGTTCTTGCAATTTGATTTTGATACTATCGTAGAGGCCACAAACAACTTCTCTGATGACAATAAATTAGGGGAAGGAGGATTTGGTCAGGTTTACAAGGGTATGCTATTTAATGGACAAGAGATTGCTGTGAAGAGGCTATCCAGAAGTTCTGGTCAAGGCATAGAAGAATTCAAGAATGAGGTGGTTTTGGTAGCCAAACTACAACACAGAAATCTTGTTAGGATTCTTGGGTTTTGCTTGGATGGTGAAGAAAAGATGCTCATTTATGAATTCATGCCCAACAAAAGTCTAGACTATTTTCTATTTGACCCTGAAAAAGCACCGCAGATTAGTTGGCCGAGACGATACAAGATAATAGAAGGAATTGCACGAGGAATGCTTTATCTTCATGAAGATTCTAGACTTAGAATCATACATCGTGATCTTAAAGCTAGTAATATATTATTAGATGAGAATTTAAATCCTAAAATATCAGATTTTGGGATGGCAAGAATTTTTGGTGTTGATCAAACCCGAGGAATCACAAACAGAGTTGTTGGAACATTTGGTTACATGTCTCCGGAGTATGCAATGCATGGAGAATTTTCTATCAAAACAGATGTGTACAGCTTTGGTGTCCTTGTTCTCGAGATAATTACCGGAAAGAAGATCACATCCTTTCGCGAATCAGGCTACGCTGAGGACCTTTTGAGCTATGTTTGGAAAAAATGGAATGATGGGACACCATTAGAGTTACTGGACATGACATTGAGAGATTCATACTCAAGTGTTGAAGTAACAAGATGCATCCATGTTGGGTTATGTTGTGTTCAAGAAGATCCAGATCAAAGACCATCCATGCAGACAGTAGTTTTACTGCTAAGTAGTCATTCTGTTACTCTTGAACCACCTCAACGTCCAGCAGGTTATATTAGTAGCAAAACTGATCAAAGCTTTGCAACAAAAGATTTTGATAGCTCAGACAAGTCTACATCTAAAAGCCAATCGGTGGCAGTTTCTGTTGATGATGCATCCATCACTCAGGTGTACCCTCGATAG 2022 0.3952 MIHQKQMLHHFKISTTAYVFFCFTLIITTKTTQAATDPSYIVYHCPNTTTFSPNTTYQRNLNKLLSLLSSNSTNKNGFYYTTVGENNPENTVYGAFLCRGDLTPKACNDCVSVASKQILQNCPREKESVIWLAECMIRYSNLSFFNVAAEVPVLALTNTGSVMEQNRFMQLLADTMNTAVVEAVKGGGDKKFGTKKANFSSLQTLYTLAQCTPDLSNSGCEKCLTIATNELPSCCSGKQGGRALIPSCNIRYEFYPFYHEMSVPAPEEPRPNPQGNKSRNSLVIIIAIVAPIVIILLLTFFVCWTISEKKRIKFNSVPQESVEISRVEFLQFDFDTIVEATNNFSDDNKLGEGGFGQVYKGMLFNGQEIAVKRLSRSSGQGIEEFKNEVVLVAKLQHRNLVRILGFCLDGEEKMLIYEFMPNKSLDYFLFDPEKAPQISWPRRYKIIEGIARGMLYLHEDSRLRIIHRDLKASNILLDENLNPKISDFGMARIFGVDQTRGITNRVVGTFGYMSPEYAMHGEFSIKTDVYSFGVLVLEIITGKKITSFRESGYAEDLLSYVWKKWNDGTPLELLDMTLRDSYSSVEVTRCIHVGLCCVQEDPDQRPSMQTVVLLLSSHSVTLEPPQRPAGYISSKTDQSFATKDFDSSDKSTSKSQSVAVSVDDASITQVYPR 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g04427 673 ProSitePatterns Serine/Threonine protein kinases active-site signature. 465 477 IPR008271 GO:0004672|GO:0006468
Mepo4g04427 673 Gene3D Transferase(Phosphotransferase) domain 1 420 624 - -
Mepo4g04427 673 MobiDBLite consensus disorder prediction 643 673 - -
Mepo4g04427 673 Gene3D - 38 144 IPR038408 -
Mepo4g04427 673 Gene3D - 151 257 IPR038408 -
Mepo4g04427 673 Pfam Salt stress response/antifungal 165 254 IPR002902 -
Mepo4g04427 673 Pfam Salt stress response/antifungal 45 141 IPR002902 -
Mepo4g04427 673 ProSiteProfiles Gnk2-homologous domain profile. 150 257 IPR002902 -
Mepo4g04427 673 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 38 144 - -
Mepo4g04427 673 Pfam Protein tyrosine and serine/threonine kinase 347 613 IPR001245 GO:0004672|GO:0006468
Mepo4g04427 673 FunFam Cysteine-rich receptor-like protein kinase 10 307 419 - -
Mepo4g04427 673 SMART serkin_6 344 621 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g04427 673 SUPERFAMILY Protein kinase-like (PK-like) 321 615 IPR011009 -
Mepo4g04427 673 FunFam Cysteine-rich receptor-like protein kinase 25 152 257 - -
Mepo4g04427 673 Gene3D Phosphorylase Kinase; domain 1 305 419 - -
Mepo4g04427 673 ProSitePatterns Protein kinases ATP-binding region signature. 350 372 IPR017441 GO:0005524
Mepo4g04427 673 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 48 669 - -
Mepo4g04427 673 ProSiteProfiles Gnk2-homologous domain profile. 39 144 IPR002902 -
Mepo4g04427 673 FunFam cysteine-rich receptor-like protein kinase 10 420 622 - -
Mepo4g04427 673 CDD STKc_IRAK 350 612 - -
Mepo4g04427 673 ProSiteProfiles Protein kinase domain profile. 344 621 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g04427 Mepo-Chr4 54088841 54092576 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g04427 11 673 Receptor kinase-like Gene Family AT4G05200 51.029 0.0 692
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mepo4g04427 PK_Tyr_Ser-Thr 7.3e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g04427 - - cave:132168824 747.273