Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g04408 ATGGGTCAGATGCTATATTCGAATTCCAATGGAACACAGGACTACTCAACTGGTCAATACAAGTTATTGGTTCAAAAATCCGATGGCAATATTGTCATATCGGCTTTTCGGTTTTCAGATCCTGGTTACTGGTCTGCTTCAACAAATTCTCACACAGATGTAAGACTTATATTCAACAACGTAACAGCTTTTCTTTATGCTGTCAATGGAACAGAAAACATATTTAACATGACAACAGAAGTGCCTTCTCCAGTCGAAAATTACTATCACCGTGCAACAATCAACGACCAAGGAAATTTTCAACAGCTGATTTACCTTAAAGAGAGTGGAAAAGAATGGACAGTTATATGGCAGGCTATAACACAGCCATGCACAGTGAATGCTATTTGTGGTGTGTATGGTTTTTGCACTTCACCTGATAACAACACAGTTAACTGTAGCTGTTTACCTGGATACACATCTTTTGATTCAAATTTTCCCTCCAAAGGTTGTTATCCCAATGTGGTGATGGATTTCAGTGCTGCAAATTCCTCTGCATCAAACATCACAGTGGTGAAAATTCAAAATGCTGATATACCAAACAACATATTTGTCGATTTGCAAATAATTGACTCATCTGATTTGGATAATTGCAGTAAGGAAGTGATGGATGATTGGTTCTGCATGGCCGCTGTTTGGATTGACTCAGTTTGTTATAAGAAAAAGACGCCTTTTTTAAATGCTAGAATAAGTATTCCTGAAACTAACACTAGAGTGTTACTGATTAAAATTGCTCAAGTTCTTCAAAAGGATAAAAATGATTCTTTTTCTCGAGTCGTTTTGCTTGTAGCACTCTCATTGTGTTCCTTACTTGCTATTGTATTTGCAACTATTGCGATCTATTACCATCCAACATTCAGCTATCTTATCAAGAAAGAGACGCCGCTGAAGCCAAAGCCTGTGGACATCAACCTAAAGGCATTTTCATTCCAAGAGTTGAGAGAAGCAACAAACGGATTTAGAAACGAACTTGGTCGTGGTGGTTTTGGTACAGTCTACAGTGGTGTTTTGAACTTGGAGGGTGAACAAGTTGAGGTTGCTGTGAAACAACTTGAAAATATAGAGGGAAAAGGTGATGAAGAGTTTGTTAATGAAGTTCAAGTAATTGCTATGACGCATCACAAAAATCTTGTGAAGTTGGTGGGTTTCTGCAACAAGGAGAATCATCGTCTTCTTGTTTACAAAATGATGAGAAATGGGACGATATCAAGTTTCATTTTTAAGGAGGAGGATAAAGATAAACCAAGTTGGGAACATAGAGCTAAAATTGTTGTTGAGATTGCTAGAGGCTTGATGTACCTGCATGAAGAGTGTGACCCTCAGATAATCCACTGCGACATAAAGCCGCAGAATGTTCTTCTTGACTCAAATTATACGGCAAAAATTTCAGATTTTGGAATGGCAAAGCTATTAATGAATGACAGAAGTAGAACAAGCACAAATGTTAGAGGGACAATGGGATATTTGGCACCAGAATGGCTTAAAAATGCACCTATTACTGCAAAAGTGGATATCTACAGCTTTGGTGTCATGTTGCTTGAAATATTATTTTGTAGAAAGCATATTGAGTTGCATCAAATTGAAGATGGAACAGAAGGTGGTGATGACATGATACTTATAGATTGGATTCTATATTGGGCAAAAGAGGGGAAACTAAGAGACATTGTTAGCCATGATGTTGAAGTTGTTAATGATTTCAATAGGTTTGAGAGAATGACTATGGTTGGTCTGTGGTGCTTGTGTCCTAATCCAACTATCAGGCCATCTATTGCAAAGGTGTTGCAGATGTTGGAAGGAGATTCTGAAGTTAGTGTTCCACCATTGTTTGATGGGCAAATTTTGTAA 1884 0.3774 MGQMLYSNSNGTQDYSTGQYKLLVQKSDGNIVISAFRFSDPGYWSASTNSHTDVRLIFNNVTAFLYAVNGTENIFNMTTEVPSPVENYYHRATINDQGNFQQLIYLKESGKEWTVIWQAITQPCTVNAICGVYGFCTSPDNNTVNCSCLPGYTSFDSNFPSKGCYPNVVMDFSAANSSASNITVVKIQNADIPNNIFVDLQIIDSSDLDNCSKEVMDDWFCMAAVWIDSVCYKKKTPFLNARISIPETNTRVLLIKIAQVLQKDKNDSFSRVVLLVALSLCSLLAIVFATIAIYYHPTFSYLIKKETPLKPKPVDINLKAFSFQELREATNGFRNELGRGGFGTVYSGVLNLEGEQVEVAVKQLENIEGKGDEEFVNEVQVIAMTHHKNLVKLVGFCNKENHRLLVYKMMRNGTISSFIFKEEDKDKPSWEHRAKIVVEIARGLMYLHEECDPQIIHCDIKPQNVLLDSNYTAKISDFGMAKLLMNDRSRTSTNVRGTMGYLAPEWLKNAPITAKVDIYSFGVMLLEILFCRKHIELHQIEDGTEGGDDMILIDWILYWAKEGKLRDIVSHDVEVVNDFNRFERMTMVGLWCLCPNPTIRPSIAKVLQMLEGDSEVSVPPLFDGQIL 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g04408 627 Gene3D Phosphorylase Kinase; domain 1 305 409 - -
Mepo4g04408 627 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 410 618 - -
Mepo4g04408 627 ProSiteProfiles Protein kinase domain profile. 331 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g04408 627 ProSitePatterns Protein kinases ATP-binding region signature. 337 362 IPR017441 GO:0005524
Mepo4g04408 627 Gene3D - 1 122 IPR036426 -
Mepo4g04408 627 FunFam S-receptor-like serine/threonine-protein kinase 303 409 - -
Mepo4g04408 627 Gene3D Transferase(Phosphotransferase) domain 1 410 618 - -
Mepo4g04408 627 ProSitePatterns Serine/Threonine protein kinases active-site signature. 455 467 IPR008271 GO:0004672|GO:0006468
Mepo4g04408 627 Pfam S-locus glycoprotein domain 86 153 IPR000858 GO:0048544
Mepo4g04408 627 Pfam Protein kinase domain 335 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g04408 627 SUPERFAMILY Protein kinase-like (PK-like) 315 616 IPR011009 -
Mepo4g04408 627 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 5 620 - -
Mepo4g04408 627 SMART serkin_6 331 610 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g04408 Mepo-Chr4 53871074 53872957 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g04408 317 614 Receptor kinase-like Gene Family AT1G60800 41.776 2.07e-73 244
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Mepo4g04408 Pkinase 4.7e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g04408 - - aprc:113871840 927.932