Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g04405 ATGAATGTTACCACTAAATTCCTTGCTTCTTTCATTGCATATTCTTTGCTCTTCATCGTTTCTAGAGCTCAAAGGACCAGTAATAAGAATAATAATACTATTGAATTAGGCTCCAGCATTGTTGCTGGCACTAATTCATCATGGAAATCACCCTCTGGAGATTTTGCCTTTGGATTCTACCCTCTTGTTAGTTCTCACTATCTTGTTGGAATTTGGTTTGATAAGATTCCACAGAAAACATTGGTTTGGTGTGCAAACCGTGACGATCCAGCTCGAATCAGTTCAACCATTAATCTCACAGTAAAAGGCCAACTTTTACTGCAACATGCAAATAAAACTTCAGTTCTAATATACAATTGTACAAATGCAACTTCTGCTATGATGCAAGATAATGGAAATTTTGTCTTGTTAAACTCTCATTCAAAAATCATCTGCCAGAGTTTTGATTCACCAACAGATACTATTCTACCAGGCCAAATTTTGAACATGGGTCAGATGCTTTTTTCCAATGCAAATGGAACAGAAGATTACTCAACTGGTCAATATAAATTAGAGGTTCAAATATCCGATGGCAACATTGTTATATCAGCATTTCGGTATTCGGATCCTGAAGTGCCTAGTCCAGTTCAAAACTACTATCACCGAGCAACGACCAACGACCGTGGAAATTTTCAACAGCTGATTTATCTTACAGAGAGTGGAAACCACTGGACAGTTATATGGCAGGCTATAACACATCCATGCACAGTGAATGCTATTTGTGGTATGTATGGTTTTTGCAATTCACCTGATAACAGCACAGTTAACTGTAGTTGTTTACCTGGATACACGCCTTTTGATCCAAATTTTCCATCCAAAGGGTGTTATCCTAATGTTGCCATGGATTTCTGTGCTGCAAATACAAATTCCTCTGCATCAAACATCACAATGGTGAAAATTCAAAATGCTGATATATCAAACAGCATATTTTTTGATCTACAAAGAATAGACTCATCTGATTTGGACAGTTGCAGTAAGGAAGTGATGAATGATTGTTTCTGCATGGCTGCTGTTTTGATTGACTCGGTTTGTTATAAGAAAAGGACACCTCTTTTAAATGCAAGAATAAGCATACCTGAAACTAGCAATAAAGTGACACTGATTAAAGTTCCTCAAATTCTTCAAGAGGATCAAAATGATTCATCTTCTCGAGTCGTTTTGATCGTAGCCGCATCAACCTGTTCCATGCTTGCTATTGTATTTGCAACTATTGCTATCTATTATCATCCCACATTCGGCAATCTTATCAAGAAAGAGATTCTGCCGAAGCCAAAGCCTGTGGACATCAACTTAAAGGCATTTTCATTCCAAGAGTTGAGAGAAGCGACAAACGGATTCAGAAACGAACTCGGTCGCGGAGGTTTTGGTACAGTCTATTTTGGTGTTTTGGTCTTGGAAGGGGAACAGGTTGAGGTTGCTGTGAAAAAACTTGAAAATGTTGAGGAAAAAGGTGAAAAGGAATTTGTTAATGAAGTTCAAGTAATTGGTATGACACATCACAAGAATCTTGTGAGGTTGTTCGGTTACTGCAACGAGCAGAATCATCGGCTTCTGGTGTATGAAATGATGAGAAATGGAACATTATCAAGTTTCATTTTTGAGGAGGATAAAGATAAACCAAGTTGGGAACATAGAGCTAAAATTGTTGTTGAAATTGCTAGAGGCTTGATGTACCTGCATGAAGAGTGTGACCTTCAGATAATCCACTGCGACATAAAGCCGCACAATGTTCTTCTTGACTCAAATTATACTGCAAAAATTGCAGATTTTGGAATGGCAAAGCTACTAATGAAAGACAGAAGTAGAACAAGCACTAATGTTAGAGGGACAATGGGATATTTGGCACCAGAATGGCTTAAAAATGCACCTATCACTGCAAAAGTGGATATCTACAGCTTTGGTGTCATGTTGCTTGAAATATTATTTTGTAGAAAGCACATTGAGTTGCATAAAATTGAAGATGGAACTGAAGGTGGTGATGACATGATACTTATAGATTGGGTTTTATATTGGGCAAAAGAAGGGAAACTAAGAGACATTGTTAGCCATGATGTTGACATTGTTAGCCATTGTTAG 2115 0.3764 MNVTTKFLASFIAYSLLFIVSRAQRTSNKNNNTIELGSSIVAGTNSSWKSPSGDFAFGFYPLVSSHYLVGIWFDKIPQKTLVWCANRDDPARISSTINLTVKGQLLLQHANKTSVLIYNCTNATSAMMQDNGNFVLLNSHSKIICQSFDSPTDTILPGQILNMGQMLFSNANGTEDYSTGQYKLEVQISDGNIVISAFRYSDPEVPSPVQNYYHRATTNDRGNFQQLIYLTESGNHWTVIWQAITHPCTVNAICGMYGFCNSPDNSTVNCSCLPGYTPFDPNFPSKGCYPNVAMDFCAANTNSSASNITMVKIQNADISNSIFFDLQRIDSSDLDSCSKEVMNDCFCMAAVLIDSVCYKKRTPLLNARISIPETSNKVTLIKVPQILQEDQNDSSSRVVLIVAASTCSMLAIVFATIAIYYHPTFGNLIKKEILPKPKPVDINLKAFSFQELREATNGFRNELGRGGFGTVYFGVLVLEGEQVEVAVKKLENVEEKGEKEFVNEVQVIGMTHHKNLVRLFGYCNEQNHRLLVYEMMRNGTLSSFIFEEDKDKPSWEHRAKIVVEIARGLMYLHEECDLQIIHCDIKPHNVLLDSNYTAKIADFGMAKLLMKDRSRTSTNVRGTMGYLAPEWLKNAPITAKVDIYSFGVMLLEILFCRKHIELHKIEDGTEGGDDMILIDWVLYWAKEGKLRDIVSHDVDIVSHC 704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g04405 704 ProSitePatterns Protein kinases ATP-binding region signature. 463 489 IPR017441 GO:0005524
Mepo4g04405 704 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase LECRK1 28 149 - -
Mepo4g04405 704 Gene3D - 146 246 IPR036426 -
Mepo4g04405 704 Gene3D Transferase(Phosphotransferase) domain 1 536 704 - -
Mepo4g04405 704 SMART serkin_6 457 694 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g04405 704 Pfam Protein kinase domain 461 661 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g04405 704 PIRSF SRK 205 702 IPR024171 GO:0004674
Mepo4g04405 704 PIRSF SRK 2 220 IPR024171 GO:0004674
Mepo4g04405 704 Pfam D-mannose binding lectin 80 163 IPR001480 -
Mepo4g04405 704 Gene3D Phosphorylase Kinase; domain 1 434 535 - -
Mepo4g04405 704 ProSiteProfiles Protein kinase domain profile. 457 704 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g04405 704 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 43 697 - -
Mepo4g04405 704 Pfam S-locus glycoprotein domain 210 278 IPR000858 GO:0048544
Mepo4g04405 704 SUPERFAMILY alpha-D-mannose-specific plant lectins 67 196 IPR036426 -
Mepo4g04405 704 ProSiteProfiles Bulb-type lectin domain profile. 33 149 IPR001480 -
Mepo4g04405 704 Gene3D - 26 145 IPR036426 -
Mepo4g04405 704 ProSitePatterns Serine/Threonine protein kinases active-site signature. 580 592 IPR008271 GO:0004672|GO:0006468
Mepo4g04405 704 SMART blect_4 39 151 IPR001480 -
Mepo4g04405 704 FunFam S-receptor-like serine/threonine-protein kinase 430 535 - -
Mepo4g04405 704 SUPERFAMILY Protein kinase-like (PK-like) 441 661 IPR011009 -
Mepo4g04405 704 FunFam Putative receptor-like protein kinase 536 703 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g04405 Mepo-Chr4 53849512 53851738 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g04405 443 699 Receptor kinase-like Gene Family AT1G60800 41.221 2.43e-60 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Mepo4g04405 Pkinase 2e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g04405 - - aprc:113871840 990.334