Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g04368 ATGTTCTCTTACCCAAATAATTTCCCTTCATCATCTTCTTCTTCTTACCCTAGTAGTACCCTTTCTTTTCTCATTGACAATCCTGAAAATAATGATTTTCCAAATAACAATACTACTCTTCTTGATGATTCACTACTTTCTATTCCTTTCACTACATCAACACATATTGATGATGTTGTTCCATTCCCTGATGCTAATTTTGCAGATTGTAACAACACTGCAATGTTTGAACAAGATAATGGCTACAACTTTGGTGTTACTAGTAGTTTTCCAATTCCAAATTTTGTTGTGACAGAGCAGAAACAACCAGCAGCAGTTATAGGAGGAAAGAAAGATAGGCACAGTAAGATTCACACATCACAGGGTTTGAGAGACAGAAGGGTAAGATTGTCAAGTGAAATAGCAAGAAAGTTCTTTGATCTTCAAGATATGTTAGAGTTTGACAAACCAAGTAACACACTTGAGTGGCTTTTCACTAAATCTGACACTGCAATCAAAGAACTAGCTAGAACTAAAAACGCTGCTTGTTACAACAACAGCCCATTTTTTGATTCAAATAGCAACAAATCTTTTTCCGGCGGTGGTGGCGGCGATGGTAGTTGTTCTTCTAAAGGGAGAAAATTGAAATGGACACAGAAAGAAGAAACAAAAAAAGAGTCAAGAGAAAGAGCAAGAGCAAGAGCTAGAGAAAGGACTTGTTACAAGATGTGTAGCAGTGGAAGAATGCAACAAGAAGAAATTAGGTACCCTGGGCCTGTTGGAGATTCAACAAATACTCAACAAATTCTGCAACAATTGATGTCATCTTCAACATCACCTGTTGATAGTACTGAAACTGAGGCTTATGCAAGATGGCGTCAGCTTCTTCAACTTCAGACCTATAGTAACCCTTCTTTTCATAATCATCATAACCTATTGGATAGTGAAATACCTAGAGATCATGGTGGATTTAATGTGATTGAGGAATCCATTATGATTAAAAGGAACATGATGTCTGCTACTTCTTCTCAATATCATCACCAAAACCTAATTCCTACTATCCCTAAGGAATTACCAAGTTTCAACCACAATATTAATGATTACTCCTTATTCCCTTGTTCAACTCCAAATTGGGAGACTAGCTCCAACTTTTGTGGAATAGCCACTGTGAATCTATCTACATGCTTCTTGAATCCGTGGTAA 1182 0.3697 MFSYPNNFPSSSSSSYPSSTLSFLIDNPENNDFPNNNTTLLDDSLLSIPFTTSTHIDDVVPFPDANFADCNNTAMFEQDNGYNFGVTSSFPIPNFVVTEQKQPAAVIGGKKDRHSKIHTSQGLRDRRVRLSSEIARKFFDLQDMLEFDKPSNTLEWLFTKSDTAIKELARTKNAACYNNSPFFDSNSNKSFSGGGGGDGSCSSKGRKLKWTQKEETKKESRERARARARERTCYKMCSSGRMQQEEIRYPGPVGDSTNTQQILQQLMSSSTSPVDSTETEAYARWRQLLQLQTYSNPSFHNHHNLLDSEIPRDHGGFNVIEESIMIKRNMMSATSSQYHHQNLIPTIPKELPSFNHNINDYSLFPCSTPNWETSSNFCGIATVNLSTCFLNPW 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g04368 393 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 108 342 IPR005333 GO:0003700
Mepo4g04368 393 Pfam TCP family transcription factor 109 238 IPR017887 -
Mepo4g04368 393 MobiDBLite consensus disorder prediction 207 225 - -
Mepo4g04368 393 MobiDBLite consensus disorder prediction 190 225 - -
Mepo4g04368 393 ProSiteProfiles R domain profile. 218 235 IPR017888 -
Mepo4g04368 393 ProSiteProfiles TCP domain profile. 110 168 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g04368 Mepo-Chr4 53491629 53492810 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g04368 110 250 TCP Transcription Factor Family AT1G67260 41.317 8.24e-26 105
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Mepo4g04368 TCP 3.3e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g04368 - - psat:127091957 439.884
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g04368 4 53491629 53492810 Mepo7g00633 7 10514177 10520285 PCT