Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g04365 ATGCAATCAAGATCTGGGGATCTTGGTACCCCTAAGACGGGGTCGGAAGGTGGAGCAAGCTCAAAGATCAACCGTAGTGGAAATCTAAGCAGTAAAGATATGATTTTCAGAGCTGATAGAATTGATCTGAAGAACTTGGATGCTGATCTAGAAAGGCACATGAGCAGAGTTTTTTCTAGAAGTATTGAGGCAAGTAGGCCTAAAGAAGAGTGGGAGATTGATTTGGCTAAACTGGAAATACGATATGTTGTTGCAAATGGGGCTTATGGCACTGTCTACAGGGGAACTTATGACAACCAAGATGTTGCTGTGAAAGTGTTGGACTGGGGTGAGGATGGTGTTGCCACTGCTGCTGAAACTGCTGCTTTACGAGCATCATTTCGGCAGGAGTTTATTGGAGCTTCAATGGGGACTTCAAATCTTAAGATTCCTTCAGATGCTGGTGGTCAAAATCCCCTTCCTTCCAAGGCATGCTGTGTTATTGTTGAGTTTGTTCATGGTGGGACATTAAAACAATTCTTAATGAAAAATAGGCGGTCGAAACTTGCATACAGGGTTGTGATTCAGTTGGCTTTGGACCTCGCAAGAGGTCTTAGTTATCTACATTCGCAGAAAATTGTTCACCGTGATGTAAAAACTGATAATATGTTGTTAGACGAGAATCTGAATTTGAAAATAGCTGATTTTGGAGTTGCTAGGGTTGAAGCGGTAAATCCAAGTGAAATGACTGGTAGTACTGGAACCGTTGGGTATATGGCACCGGAGGTTATAAATGGCAGGCCTTACAACAGAAGCTGTGATGTCTACAGCTTTGGCATTTGCTTGTGGGAAATTTACTGCTGTGACATGCCTTATATGAATCTAAGCTTTGCTGATGCGTCTGCTGCGGTTGCTAATAAGAATTTGAGACCAGAGATTCCTAGATGCTGTCCAAGTGCTTTAGCAAGTATAATGAAAAAATGCTGGGACAAGAATCCAGAAAAGCGTCCGGAAATGAAAGATGTGGTGAATTTGCTGGAAGAAATTGATACAAGTAAAGGAGGCGGAATGATAAGAGAAGATCAGACTCCATTTTGTTTTTGTTTTAAACCTGCTCGTGGTCCATAA 1107 0.4201 MQSRSGDLGTPKTGSEGGASSKINRSGNLSSKDMIFRADRIDLKNLDADLERHMSRVFSRSIEASRPKEEWEIDLAKLEIRYVVANGAYGTVYRGTYDNQDVAVKVLDWGEDGVATAAETAALRASFRQEFIGASMGTSNLKIPSDAGGQNPLPSKACCVIVEFVHGGTLKQFLMKNRRSKLAYRVVIQLALDLARGLSYLHSQKIVHRDVKTDNMLLDENLNLKIADFGVARVEAVNPSEMTGSTGTVGYMAPEVINGRPYNRSCDVYSFGICLWEIYCCDMPYMNLSFADASAAVANKNLRPEIPRCCPSALASIMKKCWDKNPEKRPEMKDVVNLLEEIDTSKGGGMIREDQTPFCFCFKPARGP 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g04365 368 Gene3D Transferase(Phosphotransferase) domain 1 167 355 - -
Mepo4g04365 368 SMART serkin_6 78 339 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g04365 368 Gene3D Phosphorylase Kinase; domain 1 66 143 - -
Mepo4g04365 368 CDD STKc_MAP3K-like 87 339 - -
Mepo4g04365 368 ProSiteProfiles Protein kinase domain profile. 78 342 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g04365 368 PRINTS Tyrosine kinase catalytic domain signature 200 218 IPR001245 GO:0004672|GO:0006468
Mepo4g04365 368 PRINTS Tyrosine kinase catalytic domain signature 310 332 IPR001245 GO:0004672|GO:0006468
Mepo4g04365 368 PRINTS Tyrosine kinase catalytic domain signature 162 175 IPR001245 GO:0004672|GO:0006468
Mepo4g04365 368 PRINTS Tyrosine kinase catalytic domain signature 266 288 IPR001245 GO:0004672|GO:0006468
Mepo4g04365 368 MobiDBLite consensus disorder prediction 1 26 - -
Mepo4g04365 368 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 55 342 - -
Mepo4g04365 368 Pfam Protein tyrosine and serine/threonine kinase 80 339 IPR001245 GO:0004672|GO:0006468
Mepo4g04365 368 ProSitePatterns Serine/Threonine protein kinases active-site signature. 206 218 IPR008271 GO:0004672|GO:0006468
Mepo4g04365 368 SUPERFAMILY Protein kinase-like (PK-like) 60 339 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g04365 Mepo-Chr4 53421673 53425292 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g04365 27 368 MAP Kinase Kinase Kinase AT3G22750 72.269 0.0 551
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Mepo4g04365 PK_Tyr_Ser-Thr 2.2e-56 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g04365 - - gmx:100803917 570.852