Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g04364 ATGGAATCCATTAACCCCTTCAATTTCGACGACGAGGGATTTGATTGGGACGCAGCTGTAAGAGATTTGGACGCTGTTGTTGAAATGAGAAGTGACGCAAAATCAATTGGAAACGAAATGGAAAAGGTTAAGGAAAAAGGAAAGGGAAAACAATCCACTCTTGATAATTTCGTTGGAATTGCGGAAAAGGAAAATCAAACGGTTCATGTTCAACAAAATGATGCTGAAATTGAAGAAGAATCTACTTCCACTCATCACATTGATACTGAAGCTGCCAAAACTTGGATTTACCCAGTTAATGTTCCTCTCCGTGACTATCAATTCCATATTACCCAGACTGCACTCTTTCAAAACACATTGGTTGCCTTGCCAACAGGACTTGGCAAAACTCTCATTGCCGCCGTTGTCATGTTTAACTACTTTAGATGGTTTCCTGAGGGAAAAATTGTATTTGCTGCTCCTTCTCGACCACTTGTCATGCAGCAGATAGAAGCATGCCATAACATTGTGGGGATACCTCAGGAATGGACAGTTGATATGACTGGTCAGATAAGTCCTCCCAAAAGAGCTCATCTGTGGAAAAAAAAGCGAGTTTTCTTTGTCACTCCACAAGTTTTGGAGAAAGACATTCATTCTGGTAAATGTTTGGTGAAGTACTTGGTATGTTTGGTGATTGATGAAGCTCACAGAGCAATGGGAAATTACTCTTATTGTGAAGCAGTTCGTGAGTTAATGGCTGTACCAGTGCAACTAAGAATATTAGCCTTAACCGCAACACCAGGATCAAAGCAGCAGACCGTCCAGGATGTTATCGATAATTTGCATATCTCCAAGCTTGAACATCGCAGCGAAACTGACCATGACGTTATGTCATATGTCCACGACAGGAAGATAGAGTTGATACAGGTTCCAATGGGCCAAGATGCTGTAGAAATAAACAATAAGTTTTTGGAAGTGATACGCCCTATTGTAGCCAGGCTTACTAGTATTGGGGCCATTCAGAACAGAGATTATCGTACTCTGAGCCCTTGCGTATTACTTGAAATGAGGGAAACGTTTCGTCAGGGGCACATGCAAGATCTTTCACATATCAACCATGGAGACGTTGAAGGGTATTTTGGAGTTCTCATTACTCTTTATTACATCCATAAACTGCTTTCAAGTCATGGAATAAGGCCAGCATTTGAGATGCTCGAAAGAAAATTGAAGCAAGGGTTTTTTGCAAAATATATGAGTAAAAATGAAGATATTCTGAAAGCAAGGCAACTAATGCAGCAAAGCTTGTCTCATGGAGCGTCGAGTCCCAAGTTGTCCAAAATGCTAGAAGTATTACTGGAACATTTCAAAACCAACGACCCACAAAACTCCAGGGTGATTATTTTCTCCAATTACAGAGAAAGTGTCAGGGACATAATGGTTGCACTTGGAGGTACTGGGGATCAAGTTAGAGCTACCGAGTTTATTGGTCAAAGTTCAGGGAAAGCAATGAAAGGTCAGTCCCAGAAAGTTCAACAGGCTGTGCTTAAGAAATTTCGGTCCGGTGCTTACAATGTCATTGTTGCTACATCAATTGGTGAAGAAGGTCTTGATATCATGGAAGTTGATCTTGTCATATCTTTTGATGCTAATATTTCACCACTAAGAATGATTCAGCGAATGGGGAGAACTGGAAGAAAGCATGATGGACGAGTTGTAGTTTTGGCTTGTGAAGGGGCCGAGTTGAAAGGCTACTTGAAAAAGAAGGCCAAGGGCAAGACTATAAGTAAACACATGCGAAATGGGGGCATAAATAGCTTTGTCTTTCATCCCAGTCCAAGGATGATTCCCCACGTCTTTAAACCAGAAGTTCAATATGTTGAACTGTCTATTGAGAAATTTATTCCTCGTCAAAATAATGTGAAAGAAGACCATCTTCAAATTTCTGCATCGAAAGTCAAACTCACTCTTGCTGAAATTGATTTACTTGAAAAATATTTTCACTCTACTGGTGAAAATAGATGTAGATTGTCGCTTATCGCCTTCCCTCACTTTCAGACATTTCCTTCTAGAGTTCATAAAGTGAAGCATTCCTGTGGAACATTGATGCTTATAGACATGATGCAGCGTTTGCAAGGACTGGCAGCATATCCAGGAGATAGCAAAAACTCCCCCCTTCAGGAAGGACAATGTTTAGAAAATAGTAAGCCACTTGACAGTACCGAGCTTGATGAAGCTAAAAACGACAATGAATTATGCTCTAGGGATACAATGGGAAGGAATGCAGATTCTGTAAATATTCTGGAGCTGGATTCCTGTGACATGGACAAGCATCAAGATGAAACGTGTGATGTTGATGAGATAATTCCCGAGACTCCAGATGGCAAGCGAAATTTTTCTAATGAAGGAGCTAATGCCAGTGAAACAGCAAATCCTGTTGAGAAGCTGACTTCTTCATTGGCTGTAGATGCATGTGATAACAGCATGCGAGATGAAGAACTTAGCCCTCGTTTAACTAATTTAATTAGAAGTGGTGTTGTTCCCGAGTCTCCCATTGATGAAAGAGGGCAATCAGGAAATAGGTTTCTCATTCGAGGTTGTATTTCACCTGTTCATCTCCAGGAAGAACAGGATGTTGATTCTTTAAATTGTAGGGAAACTAAAAAGGCCACCGTTGATAGTGGCACTGGTAAGAATGTATGTACTTCCCTTGTTAATGAAACCCAAACCCCTTTGCTTGAGCTGAAGAATTGTGCAATTACAAGAGGACGTGTCTTTGTTACTCAACTTGAGGAAGGGCATAAACATATTGTTGACCCAAGCTTCAGTGAAGAATCACATCCAAGTTGTGGTGAAATGTCTGTAAGCATTAAACCTGCTCGTAAATTCAAAAGGTTGAGGAAAATTGAAGATACTGAGAGTAATATGAATCAGAAAAACAATAATGTTTTTGATTCAACATCAAACTTTTCAAAACCATCTTCTGCCTCCAATCCCACACGATATAAGCGTGGCCAAGGTATAAGGAAACAAGCTAATGTGAGAGACTTCATTGAGGAGGAAGCCGAGGTATCTTCAGATGCCTCTGTATCTAATGATGAAGATGTCGAGGATGACAATTCTGTTGACAGTTTCATAGATGACCGAATCAATGCTACAGCAGCCAGTCAGCCTGAAGCTAGCAGAATGGACATGATGGCAATTTACAGGCGTTCGTTGCTCAGTCAAACACCGATTAGTGGAGGTCTGAAATTTTCCACTACCTTTAGTCCTGACAATGTGACTATGACTGCCAGTATTGGTGAAAGTGGTAATTCATCAGGCAAGACAGTGAGTTGTTTCCAGACAGGACAGACCAATCATCCAGCTATTCGAACGTCAGAATCAGTACGGATGGACCAGATGACCTCAGAAGCAGTGCCTTCAACTAGTTTTCCAACAGAGACAGATATAAGAAGCCGTAAAAGAAGATTGACATATCATCATTCTGTACACTTTCCAAGTAAGAATCTGGAACAAGACTTTGCTCTTCAGTCAAAGAAAGAATCAGTGAATACCAATGCAACTATAGATGGTCTATGCGATGATCAATTTTATAATGATATTGATCTTGATGAGTTGGAGGTGCAAGCAACTTCGATTCTAAAACGGAAATTAGATCCATCGATTGAAAAGCAAGATACAAACCGTCAATCTAACGAACCGAACCTGGATGTTATTATGTCTCCATCCTTCGACCTTGGTATATGA 3726 0.4053 MESINPFNFDDEGFDWDAAVRDLDAVVEMRSDAKSIGNEMEKVKEKGKGKQSTLDNFVGIAEKENQTVHVQQNDAEIEEESTSTHHIDTEAAKTWIYPVNVPLRDYQFHITQTALFQNTLVALPTGLGKTLIAAVVMFNYFRWFPEGKIVFAAPSRPLVMQQIEACHNIVGIPQEWTVDMTGQISPPKRAHLWKKKRVFFVTPQVLEKDIHSGKCLVKYLVCLVIDEAHRAMGNYSYCEAVRELMAVPVQLRILALTATPGSKQQTVQDVIDNLHISKLEHRSETDHDVMSYVHDRKIELIQVPMGQDAVEINNKFLEVIRPIVARLTSIGAIQNRDYRTLSPCVLLEMRETFRQGHMQDLSHINHGDVEGYFGVLITLYYIHKLLSSHGIRPAFEMLERKLKQGFFAKYMSKNEDILKARQLMQQSLSHGASSPKLSKMLEVLLEHFKTNDPQNSRVIIFSNYRESVRDIMVALGGTGDQVRATEFIGQSSGKAMKGQSQKVQQAVLKKFRSGAYNVIVATSIGEEGLDIMEVDLVISFDANISPLRMIQRMGRTGRKHDGRVVVLACEGAELKGYLKKKAKGKTISKHMRNGGINSFVFHPSPRMIPHVFKPEVQYVELSIEKFIPRQNNVKEDHLQISASKVKLTLAEIDLLEKYFHSTGENRCRLSLIAFPHFQTFPSRVHKVKHSCGTLMLIDMMQRLQGLAAYPGDSKNSPLQEGQCLENSKPLDSTELDEAKNDNELCSRDTMGRNADSVNILELDSCDMDKHQDETCDVDEIIPETPDGKRNFSNEGANASETANPVEKLTSSLAVDACDNSMRDEELSPRLTNLIRSGVVPESPIDERGQSGNRFLIRGCISPVHLQEEQDVDSLNCRETKKATVDSGTGKNVCTSLVNETQTPLLELKNCAITRGRVFVTQLEEGHKHIVDPSFSEESHPSCGEMSVSIKPARKFKRLRKIEDTESNMNQKNNNVFDSTSNFSKPSSASNPTRYKRGQGIRKQANVRDFIEEEAEVSSDASVSNDEDVEDDNSVDSFIDDRINATAASQPEASRMDMMAIYRRSLLSQTPISGGLKFSTTFSPDNVTMTASIGESGNSSGKTVSCFQTGQTNHPAIRTSESVRMDQMTSEAVPSTSFPTETDIRSRKRRLTYHHSVHFPSKNLEQDFALQSKKESVNTNATIDGLCDDQFYNDIDLDELEVQATSILKRKLDPSIEKQDTNRQSNEPNLDVIMSPSFDLGI 1241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g04364 1241 MobiDBLite consensus disorder prediction 1018 1034 - -
Mepo4g04364 1241 PANTHER FANCONI ANEMIA GROUP M FANCM FAMILY MEMBER 10 1225 - -
Mepo4g04364 1241 MobiDBLite consensus disorder prediction 967 996 - -
Mepo4g04364 1241 SMART ultradead3 99 299 IPR014001 -
Mepo4g04364 1241 FunFam ATP-dependent RNA helicase, putative 423 594 - -
Mepo4g04364 1241 CDD DEXDc_FANCM 101 282 IPR044749 GO:0005524
Mepo4g04364 1241 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 110 278 IPR014001 -
Mepo4g04364 1241 MobiDBLite consensus disorder prediction 1215 1241 - -
Mepo4g04364 1241 CDD FANCM_ID 310 425 IPR039686 GO:0006281|GO:0043138
Mepo4g04364 1241 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 436 607 IPR001650 -
Mepo4g04364 1241 SMART helicmild6 470 560 IPR001650 -
Mepo4g04364 1241 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 146 571 IPR027417 -
Mepo4g04364 1241 CDD SF2_C_FANCM_Hef 434 568 - -
Mepo4g04364 1241 FunFam Fanconi anemia, complementation group M 98 293 - -
Mepo4g04364 1241 Gene3D - 423 594 IPR027417 -
Mepo4g04364 1241 Gene3D - 99 293 IPR027417 -
Mepo4g04364 1241 MobiDBLite consensus disorder prediction 962 1034 - -
Mepo4g04364 1241 Pfam Helicase conserved C-terminal domain 443 559 IPR001650 -
Mepo4g04364 1241 Pfam Type III restriction enzyme, res subunit 116 260 IPR006935 GO:0003677|GO:0005524|GO:0016787
Mepo4g04364 1241 Coils Coil 26 46 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g04364 Mepo-Chr4 53396126 53410000 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g04364 391 558 Eukaryotic Initiation Factors Gene Family AT3G13920 27.473 1.23e-07 53.9