Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g04360 ATGCATGGCAATATGCAGGATGATTATTTGTTTCACCTCCTCATCACCAGACTACTCTTCGTTGAGGAGCGTGTCGATATCCATGAATTGCTTGGCCATGAACAAGACCGCTCTAGGAAGGACTCAGTTGCAGGTGAAAGGAAACCTGAAGTTTCGTCTCAGGATATAGATAAAATTAATTCAAATGAAGAAGCTCCAACAGATTCAACTCATGCATGGATTGACACAAGTGAGCTACCTGATCCTCAAACCTCAATTGATGATATTAACTATGCTCTTGGATTACTTGATGGATCAGAACCAATTGAGAGTGCAACAAATATTCGGGAAGATAATCAAACACGGGACAATCTTGCCCATGTTGCTTTAATGGATAACAATCCATTTCAGAGAGCGGATGATGAGCTTGCACGTATTAGGCGCTGTGTAGAGAGGAGCTGTCAAGACTATGCGTCTGAGACGACCAGTTTGCAAAGTAACAACTATGCTTCTACTTCAAACATCAGTTCTTGTACAACAAAATCTGACAAGAGGAATGCTTTCAATGAAAAGCCCGTGCTTCCTAGAAAACACACTAGTGATCCACAAAGGCACAAGTCAAATCTAACTAGGAAAGAAAGGTCATGCAGAAGCTGTCGCTGTAAGAAATCGAAGTGTAAGAAACTTTATTGTGAGTGCTTTGCTGCTAAAGTCTACTGCACAGGATGCTCATGTAAAGACTGCGAAAATAGACCTAAAGATACAGCTCTGCAAGCTCGCGCGGAGATTGAGTCTTGCAAACCACCTGCATTTGTTCCTAAAGCTGTACAAAATTCTGATTCGTCTCCTCAAATTGAGCTCAGAAAATAA 849 0.4146 MHGNMQDDYLFHLLITRLLFVEERVDIHELLGHEQDRSRKDSVAGERKPEVSSQDIDKINSNEEAPTDSTHAWIDTSELPDPQTSIDDINYALGLLDGSEPIESATNIREDNQTRDNLAHVALMDNNPFQRADDELARIRRCVERSCQDYASETTSLQSNNYASTSNISSCTTKSDKRNAFNEKPVLPRKHTSDPQRHKSNLTRKERSCRSCRCKKSKCKKLYCECFAAKVYCTGCSCKDCENRPKDTALQARAEIESCKPPAFVPKAVQNSDSSPQIELRK 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g04360 282 MobiDBLite consensus disorder prediction 55 81 - -
Mepo4g04360 282 SMART CXC_2 207 247 IPR033467 -
Mepo4g04360 282 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 210 244 IPR005172 -
Mepo4g04360 282 ProSiteProfiles CRC domain profile. 208 282 IPR005172 -
Mepo4g04360 282 MobiDBLite consensus disorder prediction 35 54 - -
Mepo4g04360 282 MobiDBLite consensus disorder prediction 35 81 - -
Mepo4g04360 282 MobiDBLite consensus disorder prediction 181 202 - -
Mepo4g04360 282 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 2 194 278 IPR044522 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g04360 Mepo-Chr4 53370898 53372520 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g04360 184 274 CPP Transcription Factor Family AT4G14770 51.579 6.34e-21 90.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Mepo4g04360 TCR 9e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g04360 - K21776 gmx:100804447 92.8189