Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g04355 ATGGAATCCTCTTGTAGTCTACAATTCTTAATTTCCTTCATTGTCATTCTTATATCCATCAACCCCTCACACCAATCTCTACCACCACTAAACCCAAGACTCACCAAAGCCTACATAGCACTCCAAGCATGGAAACACACATTCACCTCAGACCCAAAAAACACCACCTCAAACTGGTATGGCCCAAATGTATGCAACTACACGGGTATTTTTTGTGCACCGTCACTAGATGATCCTTATATCAATACCGTTGCTGGTATAGACATAAACCATGCAAACATAGCAGGTTCATTACCAGAAAAACTTGGTCTTTTAACAGACTTAGCTCTTATCCACATAAACTCAAACCGTTTCTATGGTTCACTCCCCAATAGTTTCAACCACCTTCACCTTCTCCATGAACTAGACATCAGCAACAACAAATTCTCAGGAACATTTCCCGAGGTTGTTCTTTGCATTCCTTCATTAAAATACTTAGACATAAGATACAACAATTTTCAAGGAAATGTTCCTAAAGTCCTCTTTGATCTCAAACTTGATGCACTTTTCATCAACAACAACAAATTCAAATTTTCTTTACCAGAAAATTTCGGAAACATGCCAGCTTCTGTTGTTGTGTTGGGGAACAATGATATACAAGGTTGTATTCCATCGAGTGTAGCGAATATGAAGGATACAATCAACGAGATAATTATGACGAACAACGGAATGAAAGGGTGTTTACCTAATGATATAGGAAAATTGGATAAAGTGACAGTGTTTGATGTTAGTTTTAATGAGTTTGTTGGTGAATTGCCTGAAAGTATCAGTGGAATGAAAAGTTTGGAGCAGTTGAATGTGGCACATAATAAATTTTCTGGTGTTATTCCTGAGAGTATATGTAGATTGCCAAGGTTGGAGAATTTAACGTATTCGTATAATTATTTCAATGGTGAATCAGAGATTTGTGTTAAGTTGGATGATAAGGATGATACAAAGAATTGCATTCCTCATATGCATTTCCAAAGATCGAGTCATGGGTGTGATGCTTTTTATGAACATCCTGTTCATTGTAGTGGTGTTGGTTGTTCTTTTGTAACTCCATCACTTCCTTGTCCGCCACCACCTTCACCGCCTCCTCCTCCGGCAGCTTACCACCATTATCTCTGA 1149 0.3821 MESSCSLQFLISFIVILISINPSHQSLPPLNPRLTKAYIALQAWKHTFTSDPKNTTSNWYGPNVCNYTGIFCAPSLDDPYINTVAGIDINHANIAGSLPEKLGLLTDLALIHINSNRFYGSLPNSFNHLHLLHELDISNNKFSGTFPEVVLCIPSLKYLDIRYNNFQGNVPKVLFDLKLDALFINNNKFKFSLPENFGNMPASVVVLGNNDIQGCIPSSVANMKDTINEIIMTNNGMKGCLPNDIGKLDKVTVFDVSFNEFVGELPESISGMKSLEQLNVAHNKFSGVIPESICRLPRLENLTYSYNYFNGESEICVKLDDKDDTKNCIPHMHFQRSSHGCDAFYEHPVHCSGVGCSFVTPSLPCPPPPSPPPPPAAYHHYL 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g04355 382 Pfam Leucine rich repeat 251 308 IPR001611 GO:0005515
Mepo4g04355 382 Pfam Leucine rich repeat 108 166 IPR001611 GO:0005515
Mepo4g04355 382 SUPERFAMILY L domain-like 38 314 - -
Mepo4g04355 382 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 24 374 - -
Mepo4g04355 382 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 223 313 - -
Mepo4g04355 382 Pfam Leucine rich repeat N-terminal domain 40 72 IPR013210 -
Mepo4g04355 382 FunFam Leucine-rich repeat extensin-like protein 1 38 199 - -
Mepo4g04355 382 Gene3D Ribonuclease Inhibitor 37 329 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g04355 Mepo-Chr4 53344998 53346146 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g04355 20 356 Leucine-rich Repeat extension Gene Families AT3G22800 64.809 1.88e-159 454
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g04355 - - mtr:25485156 696.812
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g04355 4 53344998 53346146 Mepo4g04355 4 53344998 53346146 ECH