Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g04354 ATGGAATCCTCTTGTAGTCTACAATTCTTAATTTCCTTCATTGTCATTCTCATATCCATCAACCCCTCACACCAATCTCTACCACCACTAAACCCAAGACTCACCAAAGCCTACATAGCACTCCAAGCATGGAAACACACATTCACCTCAGACCCAAAAAACACCACCTTAAACTGGTATGGCCCAAATGTATGCAACTACACAGGTATCTACTGTGCACCATCACTAGATGATCCTTACATCAATACCGTTGCTGGTATAGACATAAACCATGCAAACATAGCAGGTTCATTACCAGAACAACTTGGTCTTTTAACAGACTTAGCTCTTATCCACATAAACTCAAACCGTTTCTATGGTTCACTCCCCAATAGTTTCAACCACCTTCACCTTCTCCATGAACTAGACATCAGCAACAACAAATTCTCAGGAACATTTCCTGAGGTTGTTCTTTGCATTCCTTCATTAAAATTCTTAGACATAAGATACAATAATTTTCAAGGAAATGTTCCTAAAGGCCTGTTTGACCTTAAACTTGATGCACTTTTCATCAACAATAACAAATTCCAATTTTCTTTACCAGAAAATTTCGGAAACATGCCAGCTTCTGTTGTGGTGTTCGCGAATAATGATATACAAGGTTGTATTCCATCGAGTATAGCAAATATGAAGGATACAATCAACGAAATAATTATGACGAATAGCGGAATGAAAGGGTGTTTACCTAATGATATAGGAAAATTGGATAAAGTGACAGTGTTTGATGTTAGTTTTAATGAGTTTGTTGGTGAATTGCCTGAAAGTATCAGTGGAATGAAAAGTTTGGAGCAGTTGAATGTGGCACATAATAAATTTTCTGGTGTTATTCCTGAGAGTATATGTAGATTGCCAAGGTTGGAGAATTTAACGTATTCGTATAATTATTTCAGTGGTGAATCAGAGATTTGTGTTAAGTTGGATGATAGGAAAAATTGTATTCCTCATAGGCCTTTGCAAAGATCGAGTGATGAGTGTGATGCTTTTTATAAACATCCTGTTCATTGTAGTGGTGTTGGTTGTTCTTTTGTAACTCCATCGCCCCCTCCTCCACCACCACCTCCACCACCACCTCCTCCCCCTCCCCCTCCACCACCACCTCCTCCCCCTCCACCACCACCTCCTCCACCGCCACCGCCACCTCCACCACCACCTCCCCCTCCACCACCACCTCCGCCACCACCACCTCCCCCTCCTCCTCCTCCACCACCATCTCCTTGTCCACCACCGCCTCCATGTCCGCCACCACCTCCTCCTCCGGCAGCTTACTACCATTATCTCTGA 1320 0.4265 MESSCSLQFLISFIVILISINPSHQSLPPLNPRLTKAYIALQAWKHTFTSDPKNTTLNWYGPNVCNYTGIYCAPSLDDPYINTVAGIDINHANIAGSLPEQLGLLTDLALIHINSNRFYGSLPNSFNHLHLLHELDISNNKFSGTFPEVVLCIPSLKFLDIRYNNFQGNVPKGLFDLKLDALFINNNKFQFSLPENFGNMPASVVVFANNDIQGCIPSSIANMKDTINEIIMTNSGMKGCLPNDIGKLDKVTVFDVSFNEFVGELPESISGMKSLEQLNVAHNKFSGVIPESICRLPRLENLTYSYNYFSGESEICVKLDDRKNCIPHRPLQRSSDECDAFYKHPVHCSGVGCSFVTPSPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPSPCPPPPPCPPPPPPPAAYYHYL 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g04354 439 SUPERFAMILY L domain-like 38 315 - -
Mepo4g04354 439 Gene3D Ribonuclease Inhibitor 37 327 IPR032675 -
Mepo4g04354 439 Pfam Leucine rich repeat N-terminal domain 40 72 IPR013210 -
Mepo4g04354 439 FunFam Leucine-rich repeat extensin-like protein 1 38 199 - -
Mepo4g04354 439 MobiDBLite consensus disorder prediction 358 420 - -
Mepo4g04354 439 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 24 432 - -
Mepo4g04354 439 PRINTS Proline rich extensin signature 370 386 - -
Mepo4g04354 439 PRINTS Proline rich extensin signature 402 423 - -
Mepo4g04354 439 PRINTS Proline rich extensin signature 390 402 - -
Mepo4g04354 439 PRINTS Proline rich extensin signature 356 368 - -
Mepo4g04354 439 Pfam Leucine rich repeat 108 166 IPR001611 GO:0005515
Mepo4g04354 439 Pfam Leucine rich repeat 251 308 IPR001611 GO:0005515
Mepo4g04354 439 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 225 313 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g04354 Mepo-Chr4 53339875 53341194 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g04354 20 353 Leucine-rich Repeat extension Gene Families AT3G22800 66.569 1.95e-161 462
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g04354 - - mtr:25485156 675.626