Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g04353 ATGGGAAAAAAAGGTAAATGGCTTAAAAACTTGTTGACAGGGAAGAAGGACAAAGAAAAAGAGAAGGAAAAATGTAACACTAACCAGAATTTTTCAAATGGAACAGAAAATCCAACTACTCCTGTTTCAACAACAGCCTCAAAAGAGAAGAAGAGATGGAGTTTTAGAAGATCATCAGCAACAGCTACACCGACAGCTTCCAAGGAATTGAGTAATTCAGAAATTACTGCTTCAATGACAGTGCAAAGTACTGTCATTGATATTCAGAATGAGCAAAGGAATCATGCCATTGCTGTGGCTGCTGCTACAGCCGCGGCAGCTGATGCAGCAGTGGCAGCTGCACAAGCTGCAGCTGCTGTGATCCGGTTAACTTCTGGTTCAAATGAAACTTCTAAAAGTATAGAAGATGCTGCTGCTGTGAAAATTCAATGTGTCTTTCGATCTCACTTGGCAAGAAAGGCATTGCGTGCTTTAAGAGGATTGGTGAAGTTGCAGGCACTGATAAGGGGTCACTTGGTTAGGAAACAAGCAAAGGCAACACTCAGATGTATGCAGGCTTTGGTCACAGCACAAGCTAGAGCTCGTGCTCAAAGGATCCGAATGGTATCAGACGGAAAGCCTAATCTAAATCACAGAAATGCTATGGAAAATGACTTGTTCAGGCAAATATATAATGAAATGGACAGAGGCTTGGAAGACAACATCAAAATTGTGGAGATGGATTTTTGTGAATCAAAAGGCAACTCTACAAGCAGAAGCAGCAGTGTAAATAGACAACATTATGAACAATCTGAAAATAGATATTCCACAAATGGTTCCTACATGAAAGAAGAAAACTACAAAGTATCACCAGCTCCATCAGCCTTAACAGAATTGAGTCCAAAAGCATGCAGTGGCCATTTTGAGGATTGCTTCAGTACAGCTCAAAACAGTCCTCAATGCTATTCTGCTATATCAAAAACAGATGAATCAAATCACCCTTTTGCTTTCCCTAGGCCCTCTTATGCAGAACAAATGTCCTATGACTACCCTTTGTATCCAAGTTACATGGCTAATACTGAATCATCAAGGGCCAAAGTTAGATCACAAAGTGCACCAAAACAAAGGCCAGATTCATTTGAGAGGCAACTGAGTCGGCGGAGAATTTCAGTTGAAGGAAGAAATGTTCCTAGGCCAGTGAGGATGCAGAGGTCATCTTCACAAGTAGGTGCAGCTGCTCAGAACTACCAATATCCATGGTCAATTAAGCTTGACAGATCGGCAGTTTCACTCAAAGACAGCGAGTGTGGTTCGACAAGTACAATGCTCACAAACACTAATTACTGCAGATCCCTTGTTGCATATGATCCAGAGGGAGATAGGTACTGA 1368 0.4159 MGKKGKWLKNLLTGKKDKEKEKEKCNTNQNFSNGTENPTTPVSTTASKEKKRWSFRRSSATATPTASKELSNSEITASMTVQSTVIDIQNEQRNHAIAVAAATAAAADAAVAAAQAAAAVIRLTSGSNETSKSIEDAAAVKIQCVFRSHLARKALRALRGLVKLQALIRGHLVRKQAKATLRCMQALVTAQARARAQRIRMVSDGKPNLNHRNAMENDLFRQIYNEMDRGLEDNIKIVEMDFCESKGNSTSRSSSVNRQHYEQSENRYSTNGSYMKEENYKVSPAPSALTELSPKACSGHFEDCFSTAQNSPQCYSAISKTDESNHPFAFPRPSYAEQMSYDYPLYPSYMANTESSRAKVRSQSAPKQRPDSFERQLSRRRISVEGRNVPRPVRMQRSSSQVGAAAQNYQYPWSIKLDRSAVSLKDSECGSTSTMLTNTNYCRSLVAYDPEGDRY 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g04353 455 ProSiteProfiles IQ motif profile. 159 186 IPR000048 GO:0005515
Mepo4g04353 455 ProSiteProfiles IQ motif profile. 135 163 IPR000048 GO:0005515
Mepo4g04353 455 MobiDBLite consensus disorder prediction 357 401 - -
Mepo4g04353 455 PANTHER IQ-DOMAIN 5-RELATED 1 385 - -
Mepo4g04353 455 Gene3D - 135 189 - -
Mepo4g04353 455 SMART iq_5 134 156 IPR000048 GO:0005515
Mepo4g04353 455 SMART iq_5 157 178 IPR000048 GO:0005515
Mepo4g04353 455 MobiDBLite consensus disorder prediction 246 268 - -
Mepo4g04353 455 MobiDBLite consensus disorder prediction 10 26 - -
Mepo4g04353 455 MobiDBLite consensus disorder prediction 57 72 - -
Mepo4g04353 455 MobiDBLite consensus disorder prediction 27 48 - -
Mepo4g04353 455 MobiDBLite consensus disorder prediction 357 371 - -
Mepo4g04353 455 Pfam Protein of unknown function (DUF4005) 311 388 IPR025064 -
Mepo4g04353 455 Pfam IQ calmodulin-binding motif 162 178 IPR000048 GO:0005515
Mepo4g04353 455 Pfam IQ calmodulin-binding motif 137 156 IPR000048 GO:0005515
Mepo4g04353 455 MobiDBLite consensus disorder prediction 372 387 - -
Mepo4g04353 455 MobiDBLite consensus disorder prediction 1 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g04353 Mepo-Chr4 53330455 53333177 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g04353 1 451 IQD Protein Family AT4G14750 44.211 8.15e-106 320
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g04353 - - gmx:100817667 627.476