Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g04352 ATGGCTGGTAGGCTACCTGGTGTTGGATTGTCACCAAGGAAAAGATCAGAAAATTATCACAACAGACATGAACATTATGCTACCTACAGAGACTCTTACCTAAAGGAATCATTGGATGCACCATGGACTTCAATGACTACTACCTTAGATGAAACTGCTTTCAAAGCCAAACAACGCCTACAGAAGAAACTTGGTCACTTCTTTTCCTCTTCCAGTGAACACAATCCCAAAAAAGAAGGAAAAGAAAACAAAAGCAGCTTCCAAAAGAAAGATGCAGGATTAGGTAGGAAGTTACTAGAAAGTTCATGGTTATCACGTGGCAACAAGTTTAAGAAGGAGAGAAAAATTTGTGCTGTGTGCTTAGAAGATTTTCAGCAGGATGAAGAGGTTATGAACCTTTCTTGCTCACATAAGTATCATTCAGCATGTCTTCTTCCATGGCTTGAAGCACACCCTCATTGTCCCTATTGTAGAACTATTGTTGAGTCTTGA 492 0.3963 MAGRLPGVGLSPRKRSENYHNRHEHYATYRDSYLKESLDAPWTSMTTTLDETAFKAKQRLQKKLGHFFSSSSEHNPKKEGKENKSSFQKKDAGLGRKLLESSWLSRGNKFKKERKICAVCLEDFQQDEEVMNLSCSHKYHSACLLPWLEAHPHCPYCRTIVES 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g04352 163 MobiDBLite consensus disorder prediction 1 21 - -
Mepo4g04352 163 CDD RING-H2_PA-TM-RING 117 158 - -
Mepo4g04352 163 Pfam Ring finger domain 116 158 IPR001841 -
Mepo4g04352 163 PANTHER RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING 51 159 - -
Mepo4g04352 163 SUPERFAMILY RING/U-box 116 161 - -
Mepo4g04352 163 MobiDBLite consensus disorder prediction 72 93 - -
Mepo4g04352 163 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 99 162 IPR013083 -
Mepo4g04352 163 ProSiteProfiles Zinc finger RING-type profile. 117 158 IPR001841 -
Mepo4g04352 163 SMART ring_2 117 157 IPR001841 -
Mepo4g04352 163 MobiDBLite consensus disorder prediction 65 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g04352 Mepo-Chr4 53321129 53322833 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g04352 100 161 C3H Transcription Factor Family AT3G58720 40.323 2.44e-12 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g04352 - - gmx:100527548 240.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g04352 4 53321129 53322833 Mepo4g04352 4 53321129 53322833 ECH