Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g04348 ATGAACGGCGGAGGCACCGTTTCCTTCCGATCCATCCTCGACAGACCTCTTAACCAACTCACTGAAGATGACATTTCTCAACTCACTCGCGAAGACTGTCGCAGATTCCTCAAAGATAAAGGGATGCGCAGGCCTTCCTGGAACAAATCACAGGCGATCCAGCAGGTGATTTCTCTCAAAGCGCTTCTAGAACCTACCGACGATGATATCCCGGCTACCGTCGGCGTTGGTGTCTCCTCCGCCATTCACCACCATCACCACCACCACCACCACCCTCCTCAACCTCCGCCGAAGGCTTTGGATCCCGAAGATACTGCTTTGGAACTTCAGAAATCCACTTCACCTGTTTCTGAAAGACCTACGGAAACCAATGATGCCAACGTTGTTAACCCTCCCGGAGGGTGCACACCTAATGGGTCATTTGGGCAAATGACAATTTTCTACTGTGGTAAGGTGAATGTCTATGATGGAGTCTCGTCGGATAAGGCACGATCAATCATGCAGCTTGCTGCTGCATGTCCTTCCTCCTTTCCTCAGGATAATCCTTCAAATAAAAATGCAGCAGTTTGGGCTTCTCCTTGCAACTTACCTATTGATAAGGAAGTCCTCTTCCCTACTGACACAGCAATCCTTCAAGTTGCTCGAACAGATAAGATGGTGGAATACCCTCTGCAATACAGGGAGAAAGGAAGCACAGCTCGTGATGCTGATGTAGAGGGTCAGGCAAGCAGAGAATTGTCGCTGCGGCGATATCTTGAAAAGCGAAAGGACAGGGGAAGATCGAAGGGCAAGAAACTGACTGGCGTAACTTCATCTAACTTTGAGATGTATTTGAACCTTCCAGTGAAGCTCCATGCCTCAAATGGGAATTCAAGTCGTAGTAGCACTGACTCTCCACCACAGCCTAGACTGCCTCTAGTTTCCAGTGGCTCAGCTGAAAACCAGCCAAAAGTTACCCTTCCCATTGATTTGAATGATAAAGATGTTCAAGAATGCTAA 999 0.4835 MNGGGTVSFRSILDRPLNQLTEDDISQLTREDCRRFLKDKGMRRPSWNKSQAIQQVISLKALLEPTDDDIPATVGVGVSSAIHHHHHHHHHPPQPPPKALDPEDTALELQKSTSPVSERPTETNDANVVNPPGGCTPNGSFGQMTIFYCGKVNVYDGVSSDKARSIMQLAAACPSSFPQDNPSNKNAAVWASPCNLPIDKEVLFPTDTAILQVARTDKMVEYPLQYREKGSTARDADVEGQASRELSLRRYLEKRKDRGRSKGKKLTGVTSSNFEMYLNLPVKLHASNGNSSRSSTDSPPQPRLPLVSSGSAENQPKVTLPIDLNDKDVQEC 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g04348 332 MobiDBLite consensus disorder prediction 81 134 - -
Mepo4g04348 332 MobiDBLite consensus disorder prediction 285 318 - -
Mepo4g04348 332 ProSiteProfiles Tify domain profile. 137 172 IPR010399 -
Mepo4g04348 332 SMART tify_2 137 172 IPR010399 -
Mepo4g04348 332 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 10 275 IPR040390 -
Mepo4g04348 332 Pfam tify domain 143 171 IPR010399 -
Mepo4g04348 332 MobiDBLite consensus disorder prediction 285 332 - -
Mepo4g04348 332 MobiDBLite consensus disorder prediction 107 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g04348 Mepo-Chr4 53224211 53230900 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g04348 5 287 Tify Gene Family AT4G14720 42.857 1.06e-65 208
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Mepo4g04348 tify 9.1e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g04348 - - gmx:100808970 447.203
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g04348 4 53224211 53230900 Mepo4g04348 4 53224211 53230900 ECH