Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g04331 ATGCCAGTGAGGCAATTGAAAGAAAGCTCAGAGCAACACATTGTGATCAAAACCAATTTGCAGAATCCTAAGAATACACCAAAGGCTTCTTCTCAAAATGGAAAAGCTCCACCACCAACTTCACTACAAAACAATAACCAAACTTCACCACCTCAGCCAAGGAACAAAGGAAGAAGAAGGGGAAGTGGTGGTAGAAAATATGATCAAGGAGAAATTTTGATGAGACCCAGTTCAAGACCATGTACTGCAATAACAAGTGCTATAAATGGAAATGTTGAAAATGGTTACAACTCTGGTGACATTGATGTTTGTTTTCCTACTTCAAGCAAGTCTATGAACTTTGCTCGTAGACCTGGATTTGGACAAGTTGGGACAAAATGTATTGTGAAGGCTAACCACTTCTTTGCAGAGTTACCAGACAAGGACTTAAACCAATATGATGTTACTATTACCCCTGAGGTGTCTTCAAGAACAGTAAACAGGTCCATTATAGCTGAACTTGTAAGGTTGTATAAAGAGTCTGATTTAGGGATGAGGCTCCCAGCTTATGATGGCAGAAAAAGTCTGTATACTGCAGGACAGCTACCCTTTTCCTGGAAAGATTTTACAATTAAGCTTGTAGACGGAGAGGATGCAGTTAATTGCCCCAAGGTAAAAGAGTACAGGGTGGTAATCAAGTTTGTGGCCAGAGCAAACTTGCATCATTTAGGCCAGTTTCTAGCTGGTAAGCGTGCTGATGCGCCTCAAGAGGCACTTCAAATTCTTGATATTGTACTACGAGAGCTATCAACTAAGAGGTATTGCCCCATTGGGAGGTCTTTCTTTTCACCTGATATAAGAAGACCACAACGGCTTGGAGAGGGATTAGAGTCATGGTGTGGATTTTACCAGAGCATAAGGCCTACGCAGATGGGCCTTTCCCTCAATATAGATATGGCATCTGCTGCATTCATCGAGCCTCTTCCAGTTGTAGAATTTGTTGGCCAGCTATTAGGGAAAGATGTTCTGTCAAGACCATTGTCAGATGCTGATCGCATTAAGATTAAGAAAGGCCTTAGAGGAGTTAAAGTTGAAGTAACACACAGAGGAAGTGTAAGAAGAAAATACCGTGTTTCAGGGTTGACTTCTCAACCAACAAGAGAACTTGTGTTTCCTGTCGATGAAAATTCAACAATGAAGTCAGTAGTCGAATACTTTCAAGAGATGTATGGTTTCACTATTCAATACACACACCTTCCTTGCCTTCAAGTAGGCAACCAAAAGAAGGCTAACTACTTACCTATGGAGGCGTGCAAAATTGTCGAAGGGCAACGTTATACAAAAAGATTGAATGAGAAGCAAATTACTTCTCTATTGAAAGTTACTTGTCAGAGACCTCGCGATCGGGAAAATGACATTTTACAGACTGTTGAACATAATGCTTATGACCAAGATCCTTATGCAAAGGAATTTGGAATTAATATCAGTGAGAAGCTAGCTTCTGTTGAAGCACGAATTCTTCCCGCCCCTTGGCTTAAATATCACGAAAGTGGGAAAGAAAAGAACTGTTTACCCCATGTTGGTCAGTGGAACATGATGAATAAGAAAATGATTAATGGAATGACTGTTAACCGGTGGGCATGCATAAATTTCTCAAGGAGCGTGCAAGATAGTGTTGCTCGCACTTTTTGTAATGACCTTGCTCAAATGTGTCAAGTATCTGGCATGGAATTTAATCTGGAGCCTGTTATTCCTATCTACAATGCCAAGCCTGAGCAGGTGGAGAAAGCTTTGAAGCATGTCTACCATGTGTCAACAAACAAAACTAAAGGAAAGGAGTTAGAGCTTTTGTTAGCAATATTACCAGACAGTAATGGTTCTCTCTATGGTGATCTCAAGCGTATTTGTGAAACTGACCTTGGTATAATCTCACAATGTTGCCTTACAAAGCATGTCTTCAAAATCACTAAACAGTATTTGGCTAACGTGTCTCTGAAGATCAATGTTAAGATGGGAGGGAGAAACACTGTTCTTCTTGATGCTGCAAGCTACAGAATACCATTAGTTAGCGACATACCAACCATAATTTTTGGAGCAGATGTGACGCACCCTGAAAATGGAGAAGACTCTAGCCCCTCAATAGCAGCTGTTGTAGCCTCCCAAGATTGGCCTGAAGTGACAAAATATGCTGGTTTAGTGTGTGCTCAAGCTCATAGGCAGGAACTTATACAAGATTTATACAAAACTTGGCATGATCCTGTTCGCGGCACAGTTAGTGGTGGCATGATAAGAGATTTACTGATTTCTTTTAGGAAGGCCACGGGACAGAAGCCGCTACGAATTATATTTTACAGGGATGGTGTAAGTGAAGGACAATTTTACCAAGTATTGCTTTATGAGTTGGATGCAATCCGGAAGGCATGCGCTTCCTTAGAACCAAATTATCAGCCTCCAGTAACTTTCATAGTTGTACAAAAACGACATCATACTCGGTTATTCCCAAACAACCATAGGGACAGGAGCAGTACTGATAAAAGTGGGAATATATTGCCTGGGACTGTTGTCGATACTAAAATTTGCCATCCGACAGAATTTGACTTTTATCTCTGCAGTCATGCTGGCATCCAGGGTACTAGTCGTCCAGCGCACTATCATGTTCTATGGGATGAAAACAATTTCACAGCAGATGGAATTCAATCTTTAACCAACAATCTTTGTTATACATATGCTAGGTGCACTCGATCCGTATCCATTGTTCCTCCGGCATATTATGCACATTTAGCGGCCTTTCGAGCCCGTTTCTATATGGAACCAGAGATGCAAGAGAATGGATCGACAGGTGATGGTAATTCTAGTCATAGCTCCAAGGGAACGACAAGAGCAGCTGGAGAATGTGGTGTTAAGCCATTACCAGCCTTGAAAGATAATGTGAAGAGAGTGATGTTTTACTGTTAG 2934 0.4121 MPVRQLKESSEQHIVIKTNLQNPKNTPKASSQNGKAPPPTSLQNNNQTSPPQPRNKGRRRGSGGRKYDQGEILMRPSSRPCTAITSAINGNVENGYNSGDIDVCFPTSSKSMNFARRPGFGQVGTKCIVKANHFFAELPDKDLNQYDVTITPEVSSRTVNRSIIAELVRLYKESDLGMRLPAYDGRKSLYTAGQLPFSWKDFTIKLVDGEDAVNCPKVKEYRVVIKFVARANLHHLGQFLAGKRADAPQEALQILDIVLRELSTKRYCPIGRSFFSPDIRRPQRLGEGLESWCGFYQSIRPTQMGLSLNIDMASAAFIEPLPVVEFVGQLLGKDVLSRPLSDADRIKIKKGLRGVKVEVTHRGSVRRKYRVSGLTSQPTRELVFPVDENSTMKSVVEYFQEMYGFTIQYTHLPCLQVGNQKKANYLPMEACKIVEGQRYTKRLNEKQITSLLKVTCQRPRDRENDILQTVEHNAYDQDPYAKEFGINISEKLASVEARILPAPWLKYHESGKEKNCLPHVGQWNMMNKKMINGMTVNRWACINFSRSVQDSVARTFCNDLAQMCQVSGMEFNLEPVIPIYNAKPEQVEKALKHVYHVSTNKTKGKELELLLAILPDSNGSLYGDLKRICETDLGIISQCCLTKHVFKITKQYLANVSLKINVKMGGRNTVLLDAASYRIPLVSDIPTIIFGADVTHPENGEDSSPSIAAVVASQDWPEVTKYAGLVCAQAHRQELIQDLYKTWHDPVRGTVSGGMIRDLLISFRKATGQKPLRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFIVVQKRHHTRLFPNNHRDRSSTDKSGNILPGTVVDTKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGIQSLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPEMQENGSTGDGNSSHSSKGTTRAAGECGVKPLPALKDNVKRVMFYC 977
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g04331 977 Pfam PAZ domain 347 451 IPR003100 GO:0005515
Mepo4g04331 977 MobiDBLite consensus disorder prediction 12 55 - -
Mepo4g04331 977 SMART Piwi_a_2 609 930 IPR003165 GO:0003676
Mepo4g04331 977 MobiDBLite consensus disorder prediction 934 955 - -
Mepo4g04331 977 FunFam Argonaute 10 499 672 - -
Mepo4g04331 977 Pfam Piwi domain 610 929 IPR003165 GO:0003676
Mepo4g04331 977 Pfam N-terminal domain of argonaute 126 259 IPR032474 -
Mepo4g04331 977 MobiDBLite consensus disorder prediction 1 78 - -
Mepo4g04331 977 SMART PAZ_2_a_3 325 457 IPR003100 GO:0005515
Mepo4g04331 977 Pfam Argonaute linker 2 domain 461 507 IPR032472 -
Mepo4g04331 977 MobiDBLite consensus disorder prediction 936 952 - -
Mepo4g04331 977 SUPERFAMILY Ribonuclease H-like 601 930 IPR012337 -
Mepo4g04331 977 SMART DUF1785_2 268 320 IPR014811 -
Mepo4g04331 977 Pfam Argonaute linker 1 domain 269 318 IPR014811 -
Mepo4g04331 977 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 106 931 - -
Mepo4g04331 977 FunFam protein argonaute 10-like 678 977 - -
Mepo4g04331 977 ProSiteProfiles Piwi domain profile. 609 930 IPR003165 GO:0003676
Mepo4g04331 977 SUPERFAMILY PAZ domain 315 475 IPR036085 GO:0005515
Mepo4g04331 977 CDD Piwi_ago-like 479 929 IPR045246 -
Mepo4g04331 977 Gene3D - 499 672 - -
Mepo4g04331 977 FunFam Protein argonaute-2 314 440 - -
Mepo4g04331 977 CDD PAZ_argonaute_like 320 434 - -
Mepo4g04331 977 ProSiteProfiles PAZ domain profile. 321 435 IPR003100 GO:0005515
Mepo4g04331 977 Gene3D - 678 977 IPR036397 GO:0003676
Mepo4g04331 977 Gene3D paz domain 314 439 - -
Mepo4g04331 977 Pfam Mid domain of argonaute 518 595 IPR032473 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g04331 Mepo-Chr4 53093948 53100049 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g04331 1 977 Eukaryotic Initiation Factors Gene Family AT5G43810 80.719 0.0 1635
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo5g00221 5 1970389 1972713 Mepo4g04331 4 53093948 53100049 PCT