Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g04325 ATGGCCTCTAAAACTGAAAGCGAGAGTCCAAGAGATACCCCACCATCACCGCCGAAGAATATATACAAGGATCCAGATGATGGGCGACAACGGTTTTTGCTCGAACTGGAATTTGTTCAATGCCTTGCTAATCCTACCTACATCCACTATTTGGCTCAGAACCGATATTTTGAGGATGAAGCATTCATTGGGTACTTGAAGTATCTTCAATATTGGCAACGCCCTGAATATATTAAATTTATCATGTATCCTCACTGCCTCTATTTTCTTGAGCTTCTTCAGAATGCAAATTTTCGCAATGCAATGGCACATCCTACCAATAAGGAATTGACACATAGACAGCAGTTCTACTTCTGGAAGAACTATAGGAACAATCGGCTAAAACACATTTTACCAAGACCACTTCCAGAACCTAGTACTGCGCTTCCTGCTCCTGCTTCGACTCAACCCCAGCCACCTGTGCCTGCACTACCACCAGTACCTGCTACAAGCCTTGCTGCGACAACATCGTCTAGTCAAGCTCCTTCTCCAATGCCATATGGTATACCCCCTGGCCCCGGTATTGCAAAAAATGACATGAGGAATACTTCAGCTGATAGAAGGAAAAGAAAGTGA 615 0.4407 MASKTESESPRDTPPSPPKNIYKDPDDGRQRFLLELEFVQCLANPTYIHYLAQNRYFEDEAFIGYLKYLQYWQRPEYIKFIMYPHCLYFLELLQNANFRNAMAHPTNKELTHRQQFYFWKNYRNNRLKHILPRPLPEPSTALPAPASTQPQPPVPALPPVPATSLAATTSSSQAPSPMPYGIPPGPGIAKNDMRNTSADRRKRK 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g04325 204 Gene3D Mediator of RNA polymerase II, submodule Med31 (Soh1) 18 119 IPR038089 -
Mepo4g04325 204 MobiDBLite consensus disorder prediction 133 204 - -
Mepo4g04325 204 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 31 2 204 IPR008831 GO:0003712|GO:0006355|GO:0016592
Mepo4g04325 204 FunFam Mediator of RNA polymerase II transcription subunit 31 18 119 - -
Mepo4g04325 204 Pfam SOH1 30 122 IPR008831 GO:0003712|GO:0006355|GO:0016592
Mepo4g04325 204 MobiDBLite consensus disorder prediction 136 160 - -
Mepo4g04325 204 MobiDBLite consensus disorder prediction 1 24 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SOH1 Mepo4g04325 Med31 1.4e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g04325 K15153 - gmx:100818057 318.931