Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g04323 ATGGAAGACGAAGGCTTAATGCCTGTGACAATCATGTTTCTCATGCTGTTGCTTCTTTCTCCATCTGCATTTTCACTTCAGGAAGAAGGACAAGCATTAATGGCAATGAAGTCTTCCTTCAACAACATAGCTGACGTTCTCCTTGACTGGGATGATGTACACAATGATGACTTTTGCTCATGGCGTGGAGTTTTCTGTGATAATGCCAGTCATGCTCTTACTGTTGTATCTCTGAATTTGTCAAGCTTGAACCTTGGTGGTGAGATATCTCCAGCAATTGGTGATTTAAGAAACTTGCAATCCATAGATTTGCAAGGGAATAAACTAACTGGTCAAATCCCAGATGAAATTGGGAACTGTGGTGCACTTTTTCACCTGGATTTATCTGATAATCAACTTTATGGTGATATACCTTTCTCCATATCAAAGCTGAAGCAACTCGAGTTTTTGAACCTAAAGAACAATCAGTTGACTGGTCCTATTCCTTCCACGTTATCCCAAATTCCAAACCTTAAGACTCTTGATCTTGCTCGAAATAAGCTCATAGGAGAGATACCAAGGCTACTCTATTGGAATGAAGTATTGCAATACCTTGGATTACGAGGGAACATGTTGACTGGAATTTTGTCTCCTGATATTTGCCAATTATCTGGTTTGTGGTACTTTGATGTCAGAGGCAATAATTTGACTGGTCCTATTCCAGAAAGCATTGGCAACTGTACAAGTTTTGAAATCTTTGACATATCATACAATCAGATTACTGGGGAGATTCCTTATAACATTGGATTTCTTCAAGTTGCTACTTTGTCACTTCAAGGAAATAGATTAACTGGGAAGATACCAGAAGTGATTGGTTTGATGCAAGCTCTTGCAATTTTGGATTTGAGTGAGAATCAGTTAGTGGGACCAATTCCTCCTATACTAGGAAATCTGTCTTTCACTGGCAAGCTGTACCTTCACGGAAACATGCTTACTGGTTCAATACCTCCCGAGCTTGGCAATATGTCTAAACTGAGCTACTTGCAATTGAATGGTAATCAACTGGTGGGTGAAATTCCGAAGGAGTTTGGGAAGCTTGAAAATCTGTTTGAATTAAATCTTGCCAATAATCACCTTGAGGGATCTATTCCACATAACATCAGCTCCTGCACAGCCTTAAATCAGTTTAATGTGCATGGCAATCAGTTAAGCGGTTCTATTCCAACGACCTTTCGCAACCTTGAGAGTCTGACTTACTTGAACCTTTCTGCAAATAACTTCAAAGGGAATATACCAGTCGAGTTGGGTCATATCATTAATCTTGATACACTGGACCTATCTAGCAATAATTTTTCTGGACACGTCCCAGCATCTGTTGGTTATCTAGAGCATCTTTTGACCCTGAACTTGAGTCATAACCATCTCGAAGGTCCGTTGTCCGCTGAATTGGGGAATCTCAGAAGCATACAGACTATGGATATGTCTTTCAACAACCTGTCAGGCAGCATTCCTCCAGAAATTGGACAGCTGCAGAACCTTGCATCTCTGAGTTTGAACAACAATGATCTGCATGGGAAGATTCCAGAACAGCTCACCAATTGTTTCAGTCTTTCCACTTTGAACTTTTCTTATAACAACTTTTCTGGAGTAGTTCCGTCTTCAAAGAACTTCACGCGGTTCGCAGCTGACAGCTTCATTGGAAATCCTTTATTATGTGGAAATTGGGTAGGATCAATTTGTCGTCCTTATATTCCTAAATCAAAAGAGATATTTTCTAGAGTTGCAGTTATATGTCTCACTCTTGGTATCATCATATTATTGGCTATGGTAATTGTCGCAATCTATAGATCCATCCAATCAAAGCAGTTGGTGAAAGGATCTGGTAAGACAGGGCAAGTGCCTCCTAAACTTGTCATTCTTCATATGGATTTGGCAATACACACTTTGGATGATATAATGAGAAGCACTGAGAATCTCAGTGAGAAATTTATCATAGGGTATGGTGCCTCTAGTACTGTATACAAGTGTGTGTTGAAAAATTCCCGACCCATTGCAGTCAAGCGATTGTACAATCAGCATCCTCACAATTTAAGAGAATTTGAAACGGAGCTTGAAACAATTGGCAGCATTAGACATAGAAATCTTGTCACATTGCATGGCTATGCACTTACTCCTTATGGAAATCTCCTTTTTTATGAGTACATGGCAAATGGCTCACTCTGGGATCTTCTACATGGTCCACTGAAGGTAAAACTTGATTGGGAAACACGGATGAGGATTGCTGTTGGAGCTGCTGAAGGACTTGCTTATCTTCACCATGACTGCAACCCCCGAATTGTTCACAGGGACATCAAGTCTTCAAATATTTTGCTTGATGAGAACTTTGAGGCTCACCTCTCTGATTTTGGAACTGCAAAAAGCATCCCAGCCACAAAAACTCATGCCTCAACTTATGTTCTTGGAACTATAGGCTACATTGATCCTGAATATGCACGGACGTCTAGGCTGAATGAAAAATCAGATGTCTATAGCTTTGGCATTGTTTTGCTGGAGCTACTTACTGGGAAGAAGGCGGTGGACAACGATTCCAACTTGCATCAATTGATATTGTCCAAGGCAGATAGTAACACTGTAATGGAGGCTGTGGATCCAGAGGTATCCATTACCTGTATTGATTTGGCTCATGTCAAGAAGACCTTTCAACTTGCTCTGCTTTGCACAAGAAGGAACCCTTCTGAGAGGCCTAGCATGCATGAAGTAGCCAGGGTGCTTATTTCACTACTTCCTACACCTCCAAGTAAAGTTGTTGCAGCTGCTGCTAAGAGTTTTGACTATGCACCTTTTGTTGCCGAGAAGGGACAGCACCACAGAAAGTTGGATGGTTTACAACCTCAGCGGGATAACAATTTGTCTAATGCTCAATGGTTTGTTCGTTTTGGGGATGTCATATCCAAGAGCTCTCTCTGA 2946 0.409 MEDEGLMPVTIMFLMLLLLSPSAFSLQEEGQALMAMKSSFNNIADVLLDWDDVHNDDFCSWRGVFCDNASHALTVVSLNLSSLNLGGEISPAIGDLRNLQSIDLQGNKLTGQIPDEIGNCGALFHLDLSDNQLYGDIPFSISKLKQLEFLNLKNNQLTGPIPSTLSQIPNLKTLDLARNKLIGEIPRLLYWNEVLQYLGLRGNMLTGILSPDICQLSGLWYFDVRGNNLTGPIPESIGNCTSFEIFDISYNQITGEIPYNIGFLQVATLSLQGNRLTGKIPEVIGLMQALAILDLSENQLVGPIPPILGNLSFTGKLYLHGNMLTGSIPPELGNMSKLSYLQLNGNQLVGEIPKEFGKLENLFELNLANNHLEGSIPHNISSCTALNQFNVHGNQLSGSIPTTFRNLESLTYLNLSANNFKGNIPVELGHIINLDTLDLSSNNFSGHVPASVGYLEHLLTLNLSHNHLEGPLSAELGNLRSIQTMDMSFNNLSGSIPPEIGQLQNLASLSLNNNDLHGKIPEQLTNCFSLSTLNFSYNNFSGVVPSSKNFTRFAADSFIGNPLLCGNWVGSICRPYIPKSKEIFSRVAVICLTLGIIILLAMVIVAIYRSIQSKQLVKGSGKTGQVPPKLVILHMDLAIHTLDDIMRSTENLSEKFIIGYGASSTVYKCVLKNSRPIAVKRLYNQHPHNLREFETELETIGSIRHRNLVTLHGYALTPYGNLLFYEYMANGSLWDLLHGPLKVKLDWETRMRIAVGAAEGLAYLHHDCNPRIVHRDIKSSNILLDENFEAHLSDFGTAKSIPATKTHASTYVLGTIGYIDPEYARTSRLNEKSDVYSFGIVLLELLTGKKAVDNDSNLHQLILSKADSNTVMEAVDPEVSITCIDLAHVKKTFQLALLCTRRNPSERPSMHEVARVLISLLPTPPSKVVAAAAKSFDYAPFVAEKGQHHRKLDGLQPQRDNNLSNAQWFVRFGDVISKSSL 981
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g04323 981 SMART serkin_6 652 918 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g04323 981 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 193 302 - -
Mepo4g04323 981 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 303 576 - -
Mepo4g04323 981 ProSitePatterns Protein kinases ATP-binding region signature. 658 680 IPR017441 GO:0005524
Mepo4g04323 981 Gene3D Ribonuclease Inhibitor 265 352 IPR032675 -
Mepo4g04323 981 Gene3D Transferase(Phosphotransferase) domain 1 728 929 - -
Mepo4g04323 981 Gene3D Ribonuclease Inhibitor 194 264 IPR032675 -
Mepo4g04323 981 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 466 546 - -
Mepo4g04323 981 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 728 927 - -
Mepo4g04323 981 SUPERFAMILY L domain-like 309 566 - -
Mepo4g04323 981 Pfam Leucine Rich Repeat 98 120 IPR001611 GO:0005515
Mepo4g04323 981 SUPERFAMILY L domain-like 27 323 - -
Mepo4g04323 981 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 623 727 - -
Mepo4g04323 981 Gene3D Ribonuclease Inhibitor 353 449 IPR032675 -
Mepo4g04323 981 ProSiteProfiles Leucine-rich repeat profile. 170 192 IPR001611 GO:0005515
Mepo4g04323 981 Gene3D Ribonuclease Inhibitor 450 575 IPR032675 -
Mepo4g04323 981 Gene3D Ribonuclease Inhibitor 26 193 IPR032675 -
Mepo4g04323 981 Pfam Protein kinase domain 656 914 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g04323 981 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 26 192 - -
Mepo4g04323 981 Pfam Leucine rich repeat N-terminal domain 27 67 IPR013210 -
Mepo4g04323 981 Pfam Leucine rich repeat 433 492 IPR001611 GO:0005515
Mepo4g04323 981 Pfam Leucine rich repeat 361 420 IPR001611 GO:0005515
Mepo4g04323 981 ProSiteProfiles Protein kinase domain profile. 652 921 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g04323 981 SUPERFAMILY Protein kinase-like (PK-like) 634 917 IPR011009 -
Mepo4g04323 981 Pfam Leucine Rich repeats (2 copies) 145 186 IPR025875 -
Mepo4g04323 981 SMART LRR_typ_2 168 192 IPR003591 -
Mepo4g04323 981 SMART LRR_typ_2 455 479 IPR003591 -
Mepo4g04323 981 SMART LRR_typ_2 216 240 IPR003591 -
Mepo4g04323 981 SMART LRR_typ_2 287 311 IPR003591 -
Mepo4g04323 981 SMART LRR_typ_2 335 358 IPR003591 -
Mepo4g04323 981 SMART LRR_typ_2 503 527 IPR003591 -
Mepo4g04323 981 SMART LRR_typ_2 144 167 IPR003591 -
Mepo4g04323 981 SMART LRR_typ_2 359 383 IPR003591 -
Mepo4g04323 981 SMART LRR_typ_2 96 120 IPR003591 -
Mepo4g04323 981 SMART LRR_typ_2 407 431 IPR003591 -
Mepo4g04323 981 Gene3D Phosphorylase Kinase; domain 1 619 727 - -
Mepo4g04323 981 ProSitePatterns Serine/Threonine protein kinases active-site signature. 772 784 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g04323 Mepo-Chr4 53029332 53036753 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g04323 98 981 Receptor kinase-like Gene Family AT5G07180 76.158 0.0 1361
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIb Mepo4g04323 Pkinase 1.9e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g04323 K20718 - gmx:100811653 1658.66