Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g04319 ATGACATCAAGACGGTGTCTTGGTGTTGGTAATTGCTTCTTGCCTTTTCTCCGGGTGGTGTTGGAACCCGAGAGAATGCATGAGGCGGAGGTGAGGGTGGCTGCTTTGGGAGGTCTGGTTGGGTGTGGTCGAACAATTATATTCACTGAGACAAAGGAATCAGGATCTCAGCTTGCAGAGTTGTTGCATGGAGCAAGAGCTCTCCATGGTGACATTCAGCAAGCACAACGCGAGATTGCTTTGTCTGGCTTCAGGTCAGGGAAACTCATGACATTAGTTGCCACAAATGTGGAAGCACGGGGTCTAGATATTAATGACGTTCAGTTAACTATTCAGGCCAATGATATTGCCAAGGCTATTGGCCGAGAAGCTGCAGAAATGATTATGCAGGTGTCTGATAGTGTGATTCCTGAATTCAAGTCTGCTGCTGAGGAGCTTTTGAATAACTCTGGTTTATCAGTTGTTGATTTATTTGCAAAGGCTCTTGCCAAGGCTGTTGGTTATACTGAGATCAAGAAAAGATCTCTTCTCTCTTCTATGGAGAACTATGTCACATTACTTCTTGAGAACGGAAAACCTATCTTTACACCAACTTTTGCATATAAAATCTTGAGGAGGTTTTTGCCTGAAGAGAAGGTTGAGGCTGTGAAAGGTCTTACTATCACTGCAGATGGAAATGGTGTTGTTTTTGATGTAGCAGCCGAAGATTTAGATACATATCTTGCTGGTAAGGAAAATGCCTCAGATGTAAGATTAGAGGTGTTGAAAGAATTGCCGCGTCTGCAACAGAGAGATCAATCAAGAGGGGGTAGATTTGGCGATGGTAGTGGCCGTGGTGGCGGTAGTAGGTTTTCAGGTGGTGGCAGGAATGATCCGAGATGGTTTCATGGTTCTATTTCCAGCAGTTCCGACAACCTTTGGTTCCGCCGTCAGTCGTGTTTTGTTCTGGTTCGGATATGCTGTGCTGGTGGTGGCGCCGTCGCTTGTGTCTCGCCGGGTTCTGTCGAGGGACTGGGTGGCAATAGACATGGCTTGTGCGGTTGTTGGATTTCACAAACCCAAAAGGGTTTGTTGAGATCTGCAGGTCTCAATGTGTCAGGTCTGCCTTCACTCCGGTACCGACTTCATATCCGTCTCATGGGGCTGTTTTCGGATGGTTACGTTCGAAAGAGCATTTACGCCTGCTGCTTTGTTCAGGGGGTTGCTAGCTCAGTGTCAGAGTCTCAATCTGTTTCTCTTCTGCCTCATGCCAATGAATCCTTCAATATCAGTTATATTCAGATGAAGAATGCGGGAAGTTGTTCTTACTTCGTTGTTATATCAACTAGTTGTTCGTCTCCTAGGTATACCTCGGATCAAATTAGTATTGCTTTTGGAGATGCTTATGGAAACCAGATATATGCTCCAAGACTGGATGATCCATCTTCTGGTACATTCGAGAGCTGCTCTTCAGATTCATTTCAGATAAATGGTCCATGTGCATATCAGATATGCTATGTGTACCTCTATAGATCTGGCTCGAGTGGTTGGAAACCTGAAAGTGTGAAAATCAATGGTTATAGTGGCGGGCCTGTAACTTTCTATTACAACACTTTCATTCCCAGGGATACATGGTATGGGTTTAATTTGTGCAATGATGCTGCTTCTTCATATAAAGTAAGTGCTCAGAAATGGCTATTATTAGTGATTCTAGGATTTGTTCTGAGTTTCTGGTTGTAA 1719 0.4444 MTSRRCLGVGNCFLPFLRVVLEPERMHEAEVRVAALGGLVGCGRTIIFTETKESGSQLAELLHGARALHGDIQQAQREIALSGFRSGKLMTLVATNVEARGLDINDVQLTIQANDIAKAIGREAAEMIMQVSDSVIPEFKSAAEELLNNSGLSVVDLFAKALAKAVGYTEIKKRSLLSSMENYVTLLLENGKPIFTPTFAYKILRRFLPEEKVEAVKGLTITADGNGVVFDVAAEDLDTYLAGKENASDVRLEVLKELPRLQQRDQSRGGRFGDGSGRGGGSRFSGGGRNDPRWFHGSISSSSDNLWFRRQSCFVLVRICCAGGGAVACVSPGSVEGLGGNRHGLCGCWISQTQKGLLRSAGLNVSGLPSLRYRLHIRLMGLFSDGYVRKSIYACCFVQGVASSVSESQSVSLLPHANESFNISYIQMKNAGSCSYFVVISTSCSSPRYTSDQISIAFGDAYGNQIYAPRLDDPSSGTFESCSSDSFQINGPCAYQICYVYLYRSGSSGWKPESVKINGYSGGPVTFYYNTFIPRDTWYGFNLCNDAASSYKVSAQKWLLLVILGFVLSFWL 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g04319 572 Pfam Helicase conserved C-terminal domain 43 112 IPR001650 -
Mepo4g04319 572 Gene3D - 39 185 IPR027417 -
Mepo4g04319 572 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 32 114 IPR027417 -
Mepo4g04319 572 FunFam DEAD-box ATP-dependent RNA helicase 7 184 256 - -
Mepo4g04319 572 CDD PLAT 434 545 - -
Mepo4g04319 572 CDD GUCT_RH7_like 174 259 - -
Mepo4g04319 572 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 32 188 IPR001650 -
Mepo4g04319 572 PANTHER PLAT DOMAIN-CONTAINING PROTEIN 394 547 - -
Mepo4g04319 572 Pfam GUCT (NUC152) domain 167 262 IPR012562 GO:0003723|GO:0004386|GO:0005524
Mepo4g04319 572 MobiDBLite consensus disorder prediction 265 289 - -
Mepo4g04319 572 SUPERFAMILY RNA-binding domain, RBD 171 254 IPR035979 GO:0003676
Mepo4g04319 572 Gene3D - 186 257 - -
Mepo4g04319 572 Pfam Embryo-specific protein 3, (ATS3) 426 544 IPR010417 -
Mepo4g04319 572 SUPERFAMILY Lipase/lipooxygenase domain (PLAT/LH2 domain) 432 541 IPR036392 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g04319 Mepo-Chr4 52967126 52975495 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g04319 44 122 Eukaryotic Initiation Factors Gene Family AT3G13920 32.584 9.27e-07 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g04319 K16911 - gmx:100305495 308.916
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g04319 4 52967126 52975495 Mepo4g04319 4 52967126 52975495 ECH