Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g04313 ATGAATACTAACCGGCCACCAAACAAATTATTTTATATAGATCGTACAAATCATGGTAGTAATCGTAATTCTATTGAAGATAAGAAGAAAATGGTTCATAGGGAGATTGAGAAGCAAAGGAGACAAGAAATGGCTACCCTTCATACTTCCCTTAGATCCCTTCTCCCTCTTCACTTCATCAAGGGAAAACGTTCTTTATCTGATCAAATGAATGAGGCAGTGAATTACATAAATCACTTGAAGAAGAATATGAAAGAACTAAGTTACAAAAAGGATGAACTGAAAAAGTTCTCTAATCCTAGCCTTAAAAATAAAAGCCATGTTTCTTGTAGTTTCACTATCCACAAGAATAATAGAACTGTGGGAATTGAAATCAGTACTAGTACTGGCTTTATAGAGGAAGGTGCCCCACTTTCTAAATTTCTGGAACAACTGATGAAACATGGACTTGATGTTGTTAGCTGCTTTTCTATTCAAGTCAATGGAAGATTACTCCATAGTGTGCAGTGTGAGGTTATGAATTCCGACAGTGTAGATCTAACTGAGCTAAGAAGGAATTTTTCCAATATGAATCCATCATTTAGTTGTTCAGATTAA 597 0.3501 MNTNRPPNKLFYIDRTNHGSNRNSIEDKKKMVHREIEKQRRQEMATLHTSLRSLLPLHFIKGKRSLSDQMNEAVNYINHLKKNMKELSYKKDELKKFSNPSLKNKSHVSCSFTIHKNNRTVGIEISTSTGFIEEGAPLSKFLEQLMKHGLDVVSCFSIQVNGRLLHSVQCEVMNSDSVDLTELRRNFSNMNPSFSCSD 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g04313 198 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 27 99 IPR036638 GO:0046983
Mepo4g04313 198 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 28 80 IPR011598 GO:0046983
Mepo4g04313 198 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 24 186 - -
Mepo4g04313 198 FunFam Transcription factor bHLH126 20 108 - -
Mepo4g04313 198 Pfam Helix-loop-helix DNA-binding domain 29 81 IPR011598 GO:0046983
Mepo4g04313 198 CDD bHLH_AtORG2_like 29 96 - -
Mepo4g04313 198 Gene3D - 19 108 IPR036638 GO:0046983
Mepo4g04313 198 Coils Coil 22 42 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g04313 Mepo-Chr4 52905247 52906471 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g04313 27 190 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G51780 43.103 1.81e-37 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mepo4g04313 HLH 3.6e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g04313 - - gmx:100804315 230.335
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g04313 4 52905247 52906471 Mepo4g04313 4 52905247 52906471 ECH