Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g04312 ATGATTCGTAGGGAAGTTGAAAAGCAAAGGAGGATGCAAATGTCTATTCTATGTTCATCACTCCGTTCTCCACTTCCTTTTGAGCTCATCAAGGGTAAGCGTTCAGTATCAGATCACATAGGTGAGGCTGCAAATTATGTCCAAATTTTGAAGCAGAAAATTAGTGAACTTGAAATAAAGAGAGATAAGATGAAAGAAATGGTTAGTTCATCAAGTAGGGTTGAAACTGGAAATGAATTATCAGCAGATCCTTCAAGTGTAGTGAAGTGTGTCAAGATTGATCTAATTCCAGCTGGGGTGGAAATTGTTATATGTAGTGGTTTCGAGGATTGTAGTTCACGTTTATCAGATTTAATGAAAATAATACTTCAAGAAGGATGTGATGTTGTTCATTGTGTTACCAACCAAGTAAATGGCAAGATATTTCATACTATTAAATCTGAGGTGGAAGACTTGACACGCCTTAATCTTGCTCGGCTGCAAAATAAACTGGACCATGCAATTTTATTGCCAAGGTAA 519 0.368 MIRREVEKQRRMQMSILCSSLRSPLPFELIKGKRSVSDHIGEAANYVQILKQKISELEIKRDKMKEMVSSSSRVETGNELSADPSSVVKCVKIDLIPAGVEIVICSGFEDCSSRLSDLMKIILQEGCDVVHCVTNQVNGKIFHTIKSEVEDLTRLNLARLQNKLDHAILLPR 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g04312 172 Gene3D - 2 77 IPR036638 GO:0046983
Mepo4g04312 172 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 3 65 IPR036638 GO:0046983
Mepo4g04312 172 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 3 154 - -
Mepo4g04312 172 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 1 50 IPR011598 GO:0046983
Mepo4g04312 172 Coils Coil 47 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g04312 Mepo-Chr4 52900361 52901419 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g04312 1 164 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G51780 32.934 8.92e-25 93.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g04312 - - ccaj:109790384 225.328
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g04312 4 52900361 52901419 Mepo4g04312 4 52900361 52901419 ECH