Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g04311 ATGCCCTTGAAATGTTTATGTTGTTTTCTCTCTAATGAAGAGCAAAGCCATAAACGGAATGTTGATGACAAGAAAAATATTAGGGACTATCCATGGGAAAGATACACCTTGAAAGAGTTGCTTCGTGCAACAAACAACTTTCATCAAGATAACAAGATTGGAGAAGGTGGATTTGGAAGTGTATATTGGGGTCAGACAAGTAAAGGCGTCGAGATTGCTGTGAAGCGGTTGAAGACAATGACTGCAAAAGCAGAGATGGAATTTGCAGTTGAAGTGGAAGTACTAGGAAGGGTGAGGCATAAGAATTTGTTAGGATTGAGGGGGTTCTATGCAGGAGGAGATGAAAGGTTAATTGTGTATGATTACATGCCTAATCATAGCTTGCTCACTCATTTACATGGTCAACTTGCTTCAGATTGTTTACTTGATTGGCCTAGAAGAATGAGCATAACAGTTGGTGCAGCTGAAGGTTTAGCGTACTTGCACCATGAGGCAAATCCTCACATAATTCATAGAGACATAAAGGCAAGCAATGTTCTATTAGACACAGAATTTCAAGCCAAGGTAGCTGATTTTGGTTTTGCAAAGCTAATACCAGCAGGTGTAAGCCATCTTACAACAAGGGTTAAAGGCACACTTGGTTATTTGGCACCAGAATATGCTATGTGGGGTAAGGTTTCTGAGAGTTGTGATGTTTATAGCTTTGGAATTTTGCTTTTGGAGATTATAAGTGCCAAGAAACCAATTGAAAAACTACCTGGTGGAATAAAAAGGGACATTGTTCAATGGGTCACACCATATGTACAAAAGGGTGTTTTTAAACATATTGCTGATCCAAAATTGAAAGGGAATTTTGATTTAGAGCAATTGAAATCTGTGATTATGATAGCTGTGAGGTGCACTGATAGTAGTCCTGATAAAAGGCCTAGCATGATAGAGGTGGTGGAATGGCTTAAGGATGGTGTTTCAGAGAGAAAAAGAGAGATTCCAAATTTGAGTAACAATAAGGGACATGATGAAGAAAATGATGAAAACTATGAAGAGTTTGTAACAATGCAGTCCAACAATTTGAAAATACTAAGTGACAATGATAGGCGCAAAATGAGATGA 1110 0.3838 MPLKCLCCFLSNEEQSHKRNVDDKKNIRDYPWERYTLKELLRATNNFHQDNKIGEGGFGSVYWGQTSKGVEIAVKRLKTMTAKAEMEFAVEVEVLGRVRHKNLLGLRGFYAGGDERLIVYDYMPNHSLLTHLHGQLASDCLLDWPRRMSITVGAAEGLAYLHHEANPHIIHRDIKASNVLLDTEFQAKVADFGFAKLIPAGVSHLTTRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEIISAKKPIEKLPGGIKRDIVQWVTPYVQKGVFKHIADPKLKGNFDLEQLKSVIMIAVRCTDSSPDKRPSMIEVVEWLKDGVSERKREIPNLSNNKGHDEENDENYEEFVTMQSNNLKILSDNDRRKMR 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g04311 369 FunFam PTI1-like tyrosine-protein kinase At3g15890 123 334 - -
Mepo4g04311 369 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 5 333 - -
Mepo4g04311 369 Gene3D Transferase(Phosphotransferase) domain 1 123 333 - -
Mepo4g04311 369 ProSitePatterns Protein kinases ATP-binding region signature. 53 75 IPR017441 GO:0005524
Mepo4g04311 369 SUPERFAMILY Protein kinase-like (PK-like) 31 336 IPR011009 -
Mepo4g04311 369 FunFam PTI1-like tyrosine-protein kinase At3g15890 19 122 - -
Mepo4g04311 369 ProSitePatterns Serine/Threonine protein kinases active-site signature. 169 181 IPR008271 GO:0004672|GO:0006468
Mepo4g04311 369 Gene3D Phosphorylase Kinase; domain 1 9 122 - -
Mepo4g04311 369 ProSiteProfiles Protein kinase domain profile. 47 318 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g04311 369 SMART serkin_6 47 318 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g04311 369 Pfam Protein kinase domain 47 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g04311 Mepo-Chr4 52891415 52893631 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g04311 33 325 Receptor kinase-like Gene Family AT1G60800 45.270 5.55e-83 261
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XV Mepo4g04311 Pkinase 1.5e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g04311 - - gmx:100817283 617.076