Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g04298 ATGTGGTTCGGAGAAGCTGAAAAATATGTCCAAGCTCTGTTTTCACTAGCGGCAAAGGTTTCCCCAACTATTATTTTCATTGATGAAGTGGATAGCATGCTTGGGCAGCGGTCTAGCATTAATGATAACAGCTCAATGAGAAGGGTGAAAAATGAATTCATGTCACGATGGGATGGACTATTGTCAAAACCTGATGAGAAAATTATTGTTCTTGCTGCCACAAACATGCCATTTGACCTTGATGAAGCAGTTATAAGACGGTTTCAGCGAAGGATCATGGTTGATCTTCCTTCTGCTGAAAACAGGGAAACAATCTTGAAAACTCTTCTAGCTAAGGATAAACATGAAGATTTAGACTTCAAAGAGCTTTCAACTATGACAGAAGGATACAGTGGAAGTGATCTTAAGAACTTGTGCATGACTGCAGCATATCACCCCCTTAAGGAGCTAATACAACAGGAGAAGGAAAAAGAAATGAAAAAGGTGGAAGAAGTTGAAATCTTAGATGATGCTTCCAATGCTACCGAGGAAGATAAAGTAGATCAAGTGATTGCCCTCAGACCTTTAAACATGGAAGACATTAGACAGGCAAAGAATAAGGTAACTGCAAGTTTTGCTGCAGAAGGATCAACAATGAGCAGGTTGAAGGAGTGGAATGATTTGTATGGAGAAGGAGGTTCAAGGAAGAAAAATGAGCAACTCAGTTATTTTCTTTAG 717 0.3947 MWFGEAEKYVQALFSLAAKVSPTIIFIDEVDSMLGQRSSINDNSSMRRVKNEFMSRWDGLLSKPDEKIIVLAATNMPFDLDEAVIRRFQRRIMVDLPSAENRETILKTLLAKDKHEDLDFKELSTMTEGYSGSDLKNLCMTAAYHPLKELIQQEKEKEMKKVEEVEILDDASNATEEDKVDQVIALRPLNMEDIRQAKNKVTASFAAEGSTMSRLKEWNDLYGEGGSRKKNEQLSYFL 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g04298 238 Pfam ATPase family associated with various cellular activities (AAA) 2 95 IPR003959 GO:0005524|GO:0016887
Mepo4g04298 238 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 171 IPR027417 -
Mepo4g04298 238 Gene3D - 97 201 - -
Mepo4g04298 238 Pfam AAA+ lid domain 117 160 IPR041569 -
Mepo4g04298 238 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 1 237 - -
Mepo4g04298 238 Gene3D - 1 206 IPR027417 -
Mepo4g04298 238 Coils Coil 148 168 - -
Mepo4g04298 238 ProSitePatterns AAA-protein family signature. 68 87 IPR003960 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g04298 Mepo-Chr4 52750545 52752898 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g04298 2 200 Calmodulin-binding Proteins AT3G56690 34.928 3.39e-28 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g04298 - - mtr:11428492 375.941