Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g04297 ATGCTTCCCCTTAGAAGACCATATCTATTCAAAGGTGATGGGGTACTGAAGCCATGTAAAGGTGTATTGCTTTTTGGACCTCCTGGTACAGGAAAGACAATGCTCGCAAAGGCAATTGCTAATGAGTCTGGAGCAAGTTTCATCAATGTCTCTCCGTCCACCATCAATTCAAAGTGGTCCGGACAAGCTGAAAAGAACGTCCGAGCTCTGTTTTCACTAGCAGCAGAGGTTGCCCCAACTATTATTTTCATCGATGAAGTGGATAGCATACTTGGGCGGCGGTCTAGCTCTTATGAAAACAACTCAATGAGAAGGGTGAAAAACGAGTTCATGTCACGTTGGGATGGAATATTGTCAAAACCTGATGAGAAAGTTATTGTTCTTGCTGCCACCAACATGCCATTTGACCTTGATGAAGCAGTTATAAGACGGTTTCAGCGAAGGATCATGGTTGGTCTTCCTTCTGCTGAAAACAGGGAAACAATCTTGGAAACTCTTCTAGCTAAGGATAAACATGAAGATATAGACTTCAAAGAGCTTTCAACTATGACAGAAGGATATAGTGGAAGTGATCTTAAGAACTTGTGCATTACTGCAGCATATTTCCCCCTTAAGGAGCTGACACAACATGAGAAGGAAACAAAAAAGAAAAGGAAGAGAAAGCTGGAAGAAGTTGAAATCTTAGAAGATGCTACCAAAGATGATAAAGAAGATCAAGTGACTTCCCTCAGGCCTTTAAACATGGAAGACATGAGACAGGCAAAGAATAAGGTGGCTGCAAGTTTTGCTGCAGAAGGATCAATGATGAACAGGTTGAAGGAGTGGAATGATTTGTATGGAGAAGGAGGTTCAAGGAAGAAAGAGGAGCAGCTCAGTTATTTTCTTTAG 888 0.4178 MLPLRRPYLFKGDGVLKPCKGVLLFGPPGTGKTMLAKAIANESGASFINVSPSTINSKWSGQAEKNVRALFSLAAEVAPTIIFIDEVDSILGRRSSSYENNSMRRVKNEFMSRWDGILSKPDEKVIVLAATNMPFDLDEAVIRRFQRRIMVGLPSAENRETILETLLAKDKHEDIDFKELSTMTEGYSGSDLKNLCITAAYFPLKELTQHEKETKKKRKRKLEEVEILEDATKDDKEDQVTSLRPLNMEDMRQAKNKVAASFAAEGSMMNRLKEWNDLYGEGGSRKKEEQLSYFL 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g04297 295 Gene3D - 2 275 IPR027417 -
Mepo4g04297 295 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein 1 157 - -
Mepo4g04297 295 Gene3D - 154 258 - -
Mepo4g04297 295 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 202 IPR027417 -
Mepo4g04297 295 Pfam ATPase family associated with various cellular activities (AAA) 22 152 IPR003959 GO:0005524|GO:0016887
Mepo4g04297 295 Pfam AAA+ lid domain 174 214 IPR041569 -
Mepo4g04297 295 ProSitePatterns AAA-protein family signature. 125 144 IPR003960 GO:0005524|GO:0016887
Mepo4g04297 295 Coils Coil 204 231 - -
Mepo4g04297 295 SMART AAA_5 18 155 IPR003593 GO:0016887
Mepo4g04297 295 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 1 294 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g04297 Mepo-Chr4 52740742 52743687 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g04297 3 257 Calmodulin-binding Proteins AT3G56690 36.260 3.41e-40 147