Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g04294 ATGGAAGTGAACCCTAACGGCGGCGATGTTTTCTGTGAAGAAAACAACACTAACAGTACTGAAGTATCTCCGTCGGAGACGACGGAGCCTGCGGCGGCGGTAATGAAAGAAGAGCTAACGGAAACGGAAAACAACAGCCTTATTCCGATGCCGGTTCAAACGATGACAGTGGAGGCGCCGAAGAGGTCATCGAAAGATCGTCACACGAAGGTGGAGGGACGTGGTCGGAGAATCAGGATTCCGGCGACATGCGCCGCAAGAATCTTTCAGCTGACGAGAGAGCTAGGTCACAAATCCGACGGAGAAACAATCCGGTGGTTGCTAGAACAAGCTGAACCTTCTATCATTGAAGCTACCGGCACTGGAACGGTGCCAGCCATAGCTGTTTCCGTCGGAGGTACGTTAAAGATTCCAACATCATCTCCGGCTAGACCGGACGGTGAAGATGGTCCGGTTAAACGAAGGAGAAGAGCTTCAAACAGTGAGTTTGTTGACTTGAATGATCAAGCTTCAATGTCTTCTGGATTAGCACCAATTGCTCAAACCGCATACGGTGGCGGTGAAAATGGTGGTGGTTTAGTTCCATTATGGCCTGTTGTAAGTAACGGTGTTGGGTCTAATACAACAGGACCATTTTTCATGTTCCCAAATTCAAGTATAATGAATCAGTCACAGTTTTGGGCTATTCCTGCAGCACCATTTTTCAATGTGCAAACAAGACCTATTTCTGCTATGCAAATGACACAACAACCTTCAAATGCTGCTTCATCTACTTTGGCTCCTAGTTTGAGTTCAGCAACTTCAACTAGTTGTTCTGCTACTACTGCTTCATCCTCTGCTACAAATACTCAGATGCTAAAAGATTTTTCTTTGGATATTTTTGATAAGAAAGAGTTGCAGTTTATGGGTTGTTCTTCTTCAAATTTGGAATCACCTCCCTCTTCAAATCCTTCAAATTAA 960 0.4521 MEVNPNGGDVFCEENNTNSTEVSPSETTEPAAAVMKEELTETENNSLIPMPVQTMTVEAPKRSSKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETIRWLLEQAEPSIIEATGTGTVPAIAVSVGGTLKIPTSSPARPDGEDGPVKRRRRASNSEFVDLNDQASMSSGLAPIAQTAYGGGENGGGLVPLWPVVSNGVGSNTTGPFFMFPNSSIMNQSQFWAIPAAPFFNVQTRPISAMQMTQQPSNAASSTLAPSLSSATSTSCSATTASSSATNTQMLKDFSLDIFDKKELQFMGCSSSNLESPPSSNPSN 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g04294 319 ProSiteProfiles TCP domain profile. 64 118 IPR017887 -
Mepo4g04294 319 MobiDBLite consensus disorder prediction 10 27 - -
Mepo4g04294 319 MobiDBLite consensus disorder prediction 137 165 - -
Mepo4g04294 319 MobiDBLite consensus disorder prediction 1 29 - -
Mepo4g04294 319 Pfam TCP family transcription factor 63 132 IPR017887 -
Mepo4g04294 319 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 23 286 IPR005333 GO:0003700
Mepo4g04294 319 MobiDBLite consensus disorder prediction 147 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g04294 Mepo-Chr4 52714650 52716004 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g04294 1 302 TCP Transcription Factor Family AT5G51910 49.527 9.43e-79 240
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Mepo4g04294 TCP 8.1e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g04294 - - tpra:123922458 408.683
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g04294 4 52714650 52716004 Mepo4g04294 4 52714650 52716004 ECH