Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g04288 ATGGCTGTTGCCGAGAGCTGCAGCAGCAGCGGGCGCTCAACTTCGTTCAATTGTTACAAAGTAGCAAGCATGACTGAAACCATATTGAACGCAAAGCAAACTTCTAATTTGAAAGATCGATACGTTCTTGGGGAGCAGTTGGGTTGGGGACAGTTTGGTGTCATTAGAACATGCTCCGACAGAACGACTGGAGAGGTTTTGGCATGCAAATCAATTGCTAAAGATAGGTTGGTTACTTCAGATGATATGCAGAGTGTTAAACTTGAGATTGAGATCATGGCGAAGTTATCCGGGCACCCAAATGTTGTAGATCTCAAGGCTGTTTATGAAGAGGAAGATTTTGTTCATCTGGTGATGGAACTTTGTGCTGGAGGGGAGCTGTTTCACTTGTTAGAGAAGCATGGTAGGTTTTCTGAATCTGAAGGAAGGGTTCTCTTTCGGCATCTCATGCAGATGGTTTTATATTGTCATGAAAATGGAATTGTTCACCGAGATTTAAAGCCCGAAAACATTCTCTTAGCAACTAAATCCTTCTCGTCTCCAATTAAATTAGCTGATTTTGGGCTTGCAACCTACATCAAGCCTGGACAGAGTTTGCATGGTTTAGTTGGGAGTCCATTTTATATAGCTCCAGAGGTGTTGGCAGGTGCATATAACCAGGCTGCGGATATTTGGAGTGCCGGTGTTATTCTTTACATTCTACTGAGTGGGATGCCGCCGTTTTGGGGAAAGACAAAGTCACGGATATTTGAAGCTGTTAAGGCTGCTGATTTGAGGTTCCCATCTGAACCTTGGGATCGCATCTCTAAATCTGCTAAGGATTTAATTCGCCGAATGCTCTGCATAGAACACTCTCAAAGGCTCACTGCCCAAGAGGTTTTGGACCATTGCTGGATGGAAAGCGATCCAACAAATCCGGAACAACTAAGTGAACATAAAATCGAAAGTAGTGGAGAGTGGCATATTGGTGGCGGCTCATTCTCTGCATCGTTTATGTCCAGGAATGAAGACATCAGTTTTGGTGCTGGATCACCTACATGCGATGCTCAATCACCAACATTCACATGCAAATCATCGTTTTCTTCCATTTTCGTGGAACCAGTGACACCTATTTCTGTTTCTGGCGGGTTTTCATTTCGGAGCTCAGGTGGTGGTTCCATTGGTTTGGAGTTTTCTACACCTGTTTCATCAATGCCTAGCTTTGCATTTCTCGGCCCCAGTTCCGTCGTTGAGCAAAATAGTCTTATATTTGAGTTCTCGTCTAACACGTCAGAAGTAAATGCAATTGTTAGAGATTCTCCCCTTTGCCTTGGAAATGATGTTAAAGAAAGGGATCACAAGCCTGTAGAGACTAAAAGGGCATGTGGAACCAATTGTAACAGAACACTGGGATTCCACAGCAAGAGAAACCGGACAATTGGACTTGGTGAGTGTGAGCAACTTGATCTTGTGGTGACCGAATCCGTCATTCGTTGGTTATCATGCACACAACTTCCTACATCACCAAAATCATCACTTGTCTGTTGA 1527 0.4381 MAVAESCSSSGRSTSFNCYKVASMTETILNAKQTSNLKDRYVLGEQLGWGQFGVIRTCSDRTTGEVLACKSIAKDRLVTSDDMQSVKLEIEIMAKLSGHPNVVDLKAVYEEEDFVHLVMELCAGGELFHLLEKHGRFSESEGRVLFRHLMQMVLYCHENGIVHRDLKPENILLATKSFSSPIKLADFGLATYIKPGQSLHGLVGSPFYIAPEVLAGAYNQAADIWSAGVILYILLSGMPPFWGKTKSRIFEAVKAADLRFPSEPWDRISKSAKDLIRRMLCIEHSQRLTAQEVLDHCWMESDPTNPEQLSEHKIESSGEWHIGGGSFSASFMSRNEDISFGAGSPTCDAQSPTFTCKSSFSSIFVEPVTPISVSGGFSFRSSGGGSIGLEFSTPVSSMPSFAFLGPSSVVEQNSLIFEFSSNTSEVNAIVRDSPLCLGNDVKERDHKPVETKRACGTNCNRTLGFHSKRNRTIGLGECEQLDLVVTESVIRWLSCTQLPTSPKSSLVC 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g04288 508 SMART serkin_6 41 299 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g04288 508 PANTHER SERINE/THREONINE-PROTEIN KINASE 26 310 - -
Mepo4g04288 508 Pfam Protein kinase domain 41 299 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g04288 508 Gene3D Phosphorylase Kinase; domain 1 42 127 - -
Mepo4g04288 508 SUPERFAMILY Protein kinase-like (PK-like) 38 354 IPR011009 -
Mepo4g04288 508 CDD STKc_CAMK 40 298 - -
Mepo4g04288 508 ProSitePatterns Serine/Threonine protein kinases active-site signature. 161 173 IPR008271 GO:0004672|GO:0006468
Mepo4g04288 508 Gene3D Transferase(Phosphotransferase) domain 1 128 321 - -
Mepo4g04288 508 FunFam Phosphoenolpyruvate carboxylase kinase 128 315 - -
Mepo4g04288 508 FunFam Calcium-dependent protein kinase 1 43 126 - -
Mepo4g04288 508 ProSiteProfiles Protein kinase domain profile. 41 299 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g04288 508 ProSitePatterns Protein kinases ATP-binding region signature. 47 74 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g04288 Mepo-Chr4 52668316 52672182 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g04288 28 306 EF-hand Containing Proteins AT3G57530 48.029 2.81e-96 296
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Mepo4g04288 Pkinase 8.1e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g04288 - - psat:127091783 904.82