Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g04286 ATGTTTACTATGAATCAATTTTCGGAGTCACATGATCCATGTTCATCATCTTCAGAGAGGTTTCTAGCAGAGACCATGCCGAAGAAGCGTGCAGGGAGGAAGAAGTTCAGAGAAACACGCCACCCTGTGTACCGTGGTGTAAGAAAGAGGGATTCCGGGAAGTGGGTGTGTGAAGTAAGAGAACCTAACAAGAAAACCAGAATTTGGCTTGGAACATTTCCTACACCGGAGATGGCGGCGCGTGCGCATGATGTCGCTGCGATTGCGTTGAGAGGAAGGTCTGCTTGTCTTAACTTTGCTGATTCTGCTTGGAGGTTGCCAGTTCCGGCCACGGCGGACGCAAGGGATATTCAAAAGGCGGCGGCTGAGGCAGCGGAGGCTTTCAGGCCGGAGAGTGTGTTTGAGAATAGTGAGGAGAGGAAGGATAGTGAGCCTTCGTCGACGGTGGCGGTGTCGGAGACGGTGATGGAGCAACGGGAGGAAGAAGAGGATACAGTGCCGGAGTATTTGAGAAACATGGTGCTAATGTCACCGGCACATTACTGGGGAAGTGATTGTGGTGTTGCTGACGTGGAATTTGATGAAACTGAAGTTTCTTTGTGGAGTTACTCATTTTAA 618 0.5016 MFTMNQFSESHDPCSSSSERFLAETMPKKRAGRKKFRETRHPVYRGVRKRDSGKWVCEVREPNKKTRIWLGTFPTPEMAARAHDVAAIALRGRSACLNFADSAWRLPVPATADARDIQKAAAEAAEAFRPESVFENSEERKDSEPSSTVAVSETVMEQREEEEDTVPEYLRNMVLMSPAHYWGSDCGVADVEFDETEVSLWSYSF 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g04286 205 Gene3D AP2/ERF domain 43 101 IPR036955 GO:0003700|GO:0006355
Mepo4g04286 205 MobiDBLite consensus disorder prediction 1 22 - -
Mepo4g04286 205 ProSiteProfiles AP2/ERF domain profile. 43 100 IPR001471 GO:0003700|GO:0006355
Mepo4g04286 205 MobiDBLite consensus disorder prediction 130 164 - -
Mepo4g04286 205 Pfam AP2 domain 42 92 IPR001471 GO:0003700|GO:0006355
Mepo4g04286 205 SUPERFAMILY DNA-binding domain 43 102 IPR016177 GO:0003677
Mepo4g04286 205 PRINTS Ethylene responsive element binding protein signature 44 55 IPR001471 GO:0003700|GO:0006355
Mepo4g04286 205 PRINTS Ethylene responsive element binding protein signature 66 82 IPR001471 GO:0003700|GO:0006355
Mepo4g04286 205 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D 10 203 IPR045277 GO:0003700
Mepo4g04286 205 CDD AP2 44 102 IPR001471 GO:0003700|GO:0006355
Mepo4g04286 205 MobiDBLite consensus disorder prediction 132 146 - -
Mepo4g04286 205 MobiDBLite consensus disorder prediction 1 36 - -
Mepo4g04286 205 FunFam Ethylene-responsive transcription factor 2 42 101 - -
Mepo4g04286 205 SMART rav1_2 43 106 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g04286 Mepo-Chr4 52653501 52654575 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g04286 7 203 AP2-EREBP Transcription Factor Family AT5G51990 54.286 8.02e-66 200
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mepo4g04286 AP2 3.2e-15 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo7g01194 7 19050613 19051482 Mepo4g04286 4 52653501 52654575 ECH
Mepo4g04286 4 52653501 52654575 Mepo4g04286 4 52653501 52654575 ECH
Mepo7g01194 7 19050613 19051482 Mepo4g04286 4 52653501 52654575 PCT